Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02417 ATGGCGTCGGGACAGCAATTCAAGGGAGACAGAGCGGAGGCAGCGGCCAAACTTGCAGCCAAAGACATCGGCGATATCAACAGAGCGAACGAGCGCAACGACAACTTCGACCTTCATTCCGAGGCCAACTTTAAGCAAGCACGAGCTGAAGCAGCTGCGAAGCTCGCGGCAAAGGATCTGGAGGATGTTAACAGAATGAGGGACAACAATACCACCACATTCAAAGAGCAGCAGCACTACGGCGAGAATAGACCCGGTGTGATAGGGTCCATGTTCAGAGCCGCTAAGGAAGCGGTGGTTGGGAAGCCTCACGATGCGGTTGAGACCTGTCCAAGGGTTTACGATTCCAGCAGAGGGAGGATAACGAAGGAGCAAGGTGGGTCGAAGATGGGGGAATATGCAGATTATGCAACTCAGAAGGCGAGGGAAACGAAGGATGCAACGGTGCAGAAGGCTGGGGAGTACACGGACTTTGCGACTCAGAAAGCAAAAGAAAGCAAGGACTATGCGGCGAATAAGGCAAAGGAAGCTAAAGATGCTACAGTGCAGAAAGCTTCAGAGTACAAGGATTATACTGCTGAGAAGGCTAAGGAAGGGATGGACAGTGCAACGTGGAAGCTTGGGGAGTTGAAGGACTCTGCTGCTGATGCTGCTAAAAGAGCTATGGGCTACTTCACAGGCACCAGAGACGAAACAAAGGTGGGTGGAACGGCGGAGGATACCAGGCGAAGAACCCAAGAGGTGAGGGTGCAGGATAAGGACTATGGAACGGGGCATGGAGGAGAGAAGGTGGTTATAAAAATGGAAGAGTCTCGGCCGGGAGCGGTGGCGGATGCTATGAAAGCGGCGGAGAGGGCCTTGGGCGGCGAGATGGAGGAAGAAGGTATCCTTCGTGTGGAGCGTCGTAGGGAGAAAATGTGA 921 0.5342 MASGQQFKGDRAEAAAKLAAKDIGDINRANERNDNFDLHSEANFKQARAEAAAKLAAKDLEDVNRMRDNNTTTFKEQQHYGENRPGVIGSMFRAAKEAVVGKPHDAVETCPRVYDSSRGRITKEQGGSKMGEYADYATQKARETKDATVQKAGEYTDFATQKAKESKDYAANKAKEAKDATVQKASEYKDYTAEKAKEGMDSATWKLGELKDSAADAAKRAMGYFTGTRDETKVGGTAEDTRRRTQEVRVQDKDYGTGHGGEKVVIKMEESRPGAVADAMKAAERALGGEMEEEGILRVERRREKM 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02417 306 Pfam Late embryogenesis abundant protein 134 171 IPR004238 -
Vimu6g02417 306 Pfam Late embryogenesis abundant protein 167 210 IPR004238 -
Vimu6g02417 306 PANTHER LATE EMBRYOGENESIS ABUNDANT DOMAIN-CONTAINING PROTEIN / LEA DOMAIN-CONTAINING PROTEIN 13 291 - -
Vimu6g02417 306 MobiDBLite consensus disorder prediction 233 262 - -
Vimu6g02417 306 Gene3D - 169 226 - -
Vimu6g02417 306 Gene3D - 121 168 - -
Vimu6g02417 306 MobiDBLite consensus disorder prediction 229 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02417 Vimu-Chr6 21120526 21121771 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02417 - - pvu:PHAVU_001G184600g 456.832
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02417 6 21120526 21121771 Vimu3g00895 3 10830350 10832029 PCT