Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02412 ATGGGGGCCTCGCTGTCGAACCTAGGAAGCAACGGTTCGGCCGCCGCTCCGGGCCTCGGCGACATCCCGGAGAATTGCGTCGCCCGCGTTTTCCTCCACCTCACTCCGCCGGAGATATGCAACCTAGCGCGCCTCAACCGCTCTTTTCGTGGCGCTGCCTCTGCCGATTCCGTCTGGCAAACGAAGCTGCCTGCCAACTACCAAGATCTGCTCGATTTGATGCCTCCCGAGAGGTACCGGAATCTCTCCAAGAAGGACATTTTCGCGCTGCTCTCTCGGCCAGTGCCGTTGGACGACGGCAACAAGGTGCGGCGCGTTTTTTTTTTTTTGTGTCACTGA 339 0.5959 MGASLSNLGSNGSAAAPGLGDIPENCVARVFLHLTPPEICNLARLNRSFRGAASADSVWQTKLPANYQDLLDLMPPERYRNLSKKDIFALLSRPVPLDDGNKVRRVFFFLCH 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02412 112 PANTHER F-BOX PROTEIN PP2-A15 5 102 - -
Vimu6g02412 112 MobiDBLite consensus disorder prediction 1 21 - -
Vimu6g02412 112 SUPERFAMILY F-box domain 15 88 IPR036047 GO:0005515
Vimu6g02412 112 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Vimu6g02412 112 CDD F-box_AtSKIP3-like 19 64 - -
Vimu6g02412 112 Gene3D - 18 61 - -
Vimu6g02412 112 SMART fbox_2 22 62 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02412 Vimu-Chr6 21092144 21092482 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02412 - - gmx:100807328 183.341
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02412 6 21092144 21092482 Vimu6g02412 6 21092144 21092482 ECH
Vimu6g02412 6 21092144 21092482 Vimu3g00889 3 10723145 10723618 PCT