Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00889 ATGATTTTCAGGTTTCAGACTGTGGCGTATTTGCTGCAAATATGGTGGTTTGAAGTGGACGGGGAGGTAACATTTCCATTTCCTGCTGATATTTATACTCTCTCCTTCAGGCTTCACCTTGGACGGTTTTCCAAAAGGCTTGGACGGCGTGTCTGTAATTATGAACACACCCATGGTTGGGATATAAAACCTGTGAAATTTGAATTGTCTACTTCAGATGGGCAGCAAGCATCATGTGAATACTGTTTGGATGAAAGTGAGATTGATGATACATATGGAAATCATAAGCGTGGATACTGGATAGATTATAAGGTGGGTGAATTTATTGTCAGTGGATCAGAGCCTACAACTCAAGTTAGATTTTCCATGAAACAGATTGATTGTACACATTCCAAAGGTGGCCTTTGTGTAGATTCTGTATTTATTATACCAAGTGATTTAAGAGAGCGCAAGAGAAAATGCATTTTGAAATAG 474 0.3903 MIFRFQTVAYLLQIWWFEVDGEVTFPFPADIYTLSFRLHLGRFSKRLGRRVCNYEHTHGWDIKPVKFELSTSDGQQASCEYCLDESEIDDTYGNHKRGYWIDYKVGEFIVSGSEPTTQVRFSMKQIDCTHSKGGLCVDSVFIIPSDLRERKRKCILK 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00889 157 Pfam Phloem protein 2 4 144 IPR025886 -
Vimu3g00889 157 PANTHER F-BOX PROTEIN PP2-A15 4 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00889 Vimu-Chr3 10723145 10723618 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00889 - - gmx:100796143 309.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g00889 3 10723145 10723618 Vimu3g00889 3 10723145 10723618 ECH
Vimu6g02412 6 21092144 21092482 Vimu3g00889 3 10723145 10723618 PCT