Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02314 ATGGCTTGCACCGATAACGCAACCGCCGCCATCCACCTACCAGGCGCTGCCACCACCATCTCCGCCGTGCATCCCGACATAATTCAAACCCACATCCTCACGCGCCTCGACGGCCCTGCGCTTGCTTCAATTGCCACCACCTGCTCCCAACTCCACGCCCTCTCGGAACACGAGCAGCTATGGGAGAGCATCTGCCATGCCACATGGCCCTCAACCACGACGCCACGCGTGCGCCACATAATCTCAGCGTTCCCAGGCGCCTCTCGTTCTTTTTTCTCCGACTCCTTCCCTTCGTTTGCTGCTGTGGACACTTATCGCCACGCGAACATCGAGCGTACGCCGGAGCTTGTCACGGCTGTGGACCTGTTCCACGGGAGGGAGCCGGTGCTTTCGCGGGTGGTGGAGACGGAGACGGAGTCAGGGTGGTTCCGGTGCTCGCCGTTTAGAGTTGACGTGCTGGATCCGAAGGAGGCGGTGGCGACGGCGATGGAGTATCCTCGAAGCGAGGAAGCGTGCGAGAGGCTCCGGGAGGAGTTGAGGCTGAGCTGGATAGTGGTGGATCCCGAGGGGAAGCGCGCGGTGAACGTGTCGAGCGGTAGGGCAGTGTCCGTGGAGCGGCACTGGCTGAGTGGGGAGGTGCGGGTGCGTTTCGCGACGGTGGTGGGCGGCGGGGAGAGGGGTTCGGCATCGGAGGCTGTGCTGTGCAGCGTGACTGTGACTTGCGGGAGTGAGATGCAGGTGAGGGAAGCGTGTGTGCAGATGGAGGACATGGATGGAACGATCCTGAATGGGAGGGATAGTTTGGGGATTTTGCAAAGGGCGTTGGAGGGTAAAAGGGGAACATTTTTTGTGGCCGGAGAAAAGGATAGATTCTTGGAATTCATGAATCGAAAGAGGGAAAGAAAGGAAAGGAAAATGAGAGACGAAAGAAGGTTGGACATGGCCTGCGTGGCTCTCGCGCTTTTGTCCTTTGCGGCTATTTCCACACTTTTTTTCTTCCGAATATAA 1008 0.5883 MACTDNATAAIHLPGAATTISAVHPDIIQTHILTRLDGPALASIATTCSQLHALSEHEQLWESICHATWPSTTTPRVRHIISAFPGASRSFFSDSFPSFAAVDTYRHANIERTPELVTAVDLFHGREPVLSRVVETETESGWFRCSPFRVDVLDPKEAVATAMEYPRSEEACERLREELRLSWIVVDPEGKRAVNVSSGRAVSVERHWLSGEVRVRFATVVGGGERGSASEAVLCSVTVTCGSEMQVREACVQMEDMDGTILNGRDSLGILQRALEGKRGTFFVAGEKDRFLEFMNRKRERKERKMRDERRLDMACVALALLSFAAISTLFFFRI 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02314 335 Coils Coil 292 312 - -
Vimu6g02314 335 Gene3D - 13 99 - -
Vimu6g02314 335 PANTHER F-BOX PROTEIN-RELATED 16 327 IPR045283 -
Vimu6g02314 335 SUPERFAMILY F-box domain 25 84 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02314 Vimu-Chr6 20241055 20242950 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02314 - - gmx:100801673 463.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02314 6 20241055 20242950 Vimu6g02314 6 20241055 20242950 ECH
Vimu3g01859 3 33370152 33371652 Vimu6g02314 6 20241055 20242950 PCT