Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02261 TTGTGGGCGTGCCAAATGCAAATGCAAATGCAACAAACGCAGCAGCAGGCCACGACGGCACCCATCTCAACCTCCACTCCTCCTCCCTCCTCCGGTGGCTCCGCTTCTGAGGCACCGCCGAAGCAGGTGGCTCAAGCAATGGACAAGCTAGGACAAGCCGAACGAATCATCGCCGACATCCGAATCGGCGCCGACCGCCTCCTCGAAGCGCTATTCGTCGCGGCAGCGCAGCCTCACCAAGGCAACAAGCCTCTCCAAATGTTCCTCAAGGAAGACGCCTGCATGCGTCAGTATCTTCAAGACCTTCGATCGCTTGGTAAGGAGTTGGAAGAATCTGGAGTTCTCAGTGAATCACTTCGATCGAGGAAAGACTTTTGGGGCTTGCATATGCCGCTAGTTTGTCCAGATGGCGCTGTGGTTGCATATGCGTGGAAACGACAGCTTGCGGGTCAAGCTGGCGCTTCTGCCGTCGACAGGACTACCTGCTCACTTAGGCTTTTGAATGATACCAGGTTAGCTCTCAAAGCCTTCACTGATCAGAAAAGGCGTTTTTTCCCACATCTTGATGATGGACTTGAAGCTAGTGACTCGGCTTCAAAGAAATGTTGTGTGTCTGAAGAAATTACAGTGGATCCCAAGGAAGAAATTAGGTTTTTAAGGACGCTACCTGATGTTCTGAAGTCTGTAGAGAAGGATGTGCCAGGTCTGAAAATTTTAACTTTTGAACGATTGGACTGGTTAAAAAGAGCCTCCACACTTAGCTCATCGGCAAATGAGAGTTCTCTAAAACATAACTATCACGGTTCTAATAAGTTAAGGCTAGGATCAGTTGGAACTGTTGCTGAAGAGAAGGTTACGGTGATAGAAATATTGTTCCCATCTATCTTCAGAGCTGTTGTATCCTTGCATCCTGCTGGTTCCATGGATCCTGATGCTGTAGCTTTCTTTTCTCCACATGAGCTTGGTGATGGCCAGCTCATGGTTGTTTATAGGGAATTTCTACATCTGAGTGGAAGCTACGTGCATGCAAGGGGTTTTTCAGTTCATCATGTGTTTAGACATATTACGGAGTATGCTGCGACTGCTCTTCAGTACTTTCTTGGGAACCAGACTGAAACCGGTTTATATTGTCTTTTGCATTGGATTTGCAGCTACCAGACTCTGTTTTCAAAACCATGCAGCAAATGTTCACGGCTACTTGCAATGGATAAAAAATCAACTCTGCTGTTACCTCCAGTGCATCGACCTTATTGGAAGTTTTCCTTTTCAAAAATTTTAAGCATATCCTCAAAAGACCAGAATTCTGATACTAGGACTTATCATATTGGCTGCCTTTCTGAGGAAATATAA 1350 0.4644 MWACQMQMQMQQTQQQATTAPISTSTPPPSSGGSASEAPPKQVAQAMDKLGQAERIIADIRIGADRLLEALFVAAAQPHQGNKPLQMFLKEDACMRQYLQDLRSLGKELEESGVLSESLRSRKDFWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTTCSLRLLNDTRLALKAFTDQKRRFFPHLDDGLEASDSASKKCCVSEEITVDPKEEIRFLRTLPDVLKSVEKDVPGLKILTFERLDWLKRASTLSSSANESSLKHNYHGSNKLRLGSVGTVAEEKVTVIEILFPSIFRAVVSLHPAGSMDPDAVAFFSPHELGDGQLMVVYREFLHLSGSYVHARGFSVHHVFRHITEYAATALQYFLGNQTETGLYCLLHWICSYQTLFSKPCSKCSRLLAMDKKSTLLLPPVHRPYWKFSFSKILSISSKDQNSDTRTYHIGCLSEEI 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02261 449 PANTHER 34 KDA TRANSCRIPTIONAL CO-ACTIVATOR-RELATED 10 447 IPR021627 GO:0016592
Vimu6g02261 449 MobiDBLite consensus disorder prediction 1 38 - -
Vimu6g02261 449 MobiDBLite consensus disorder prediction 1 43 - -
Vimu6g02261 449 Pfam Mediator complex subunit 27 347 444 IPR021627 GO:0016592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02261 K15170 - gmx:100782776 667.537
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02261 6 19791642 19795833 Vimu6g02261 6 19791642 19795833 ECH
Vimu6g02261 6 19791642 19795833 Vimu1g00668 1 4304681 4308055 ECH