Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02256 ATGGATATTGAGTCAACAATGGAAGCAAACAAGGGAGGGTTTTTTGCCCACTGGAAGAACTGCCTCAAGGCTTTGCTTAGGAACATCAAGTCTATGATTATCAACTTCATGAAGAGCATAACAAAGATTGGAAAAGATGATCCCAGACGAGTATTTCACTCATTAAAAGTTGCATTTGCTCTTACCTTGGTTTCCTTGATTTACTACTCAAGGCCTCTCTACGATGGTTTCGGAGTTGCTGGAATGTGGGCTGTTCTGACAGTAGTGGTTGTATTTGAATTCAGTGTAGGTGCAACTCTCTGCAAAAGTTTAAATAGAGGATGTGCTACATTATTAGCTGGTGCTTTAGGAGTTGGAGGGCAACACTTAGCTTCTGCTTTTGGAGAAAGAGAAAAACCTATTGTCCTTGGGATCCTAGTCTTCATTCTAGCTGCGGGGGCTACTTTTTTCAGATTTTTTCCAAAGATCAAGGCAAGATATGATTATGGGTTGGTGATATTTATTTTGACGTTCTGTTTAGTTGCTGTCTCGGGGTATCGAGTGGAAGAACTCTTTGAGCTTGCTCATCAGAGACTTTCAACAATTTTAATAGGGGTAACAGCTTGCATGATCATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACCTTCACAAGTTGGTAGCTTCCAACATAGAAAAGTTGTCAAATTACCTACAAGGATTTGAAGTGGAATATTTTCATTGCTCAGAGGATAAAGAAAAATGTGAGAAGTCAGTTCTTGAAGGATACAAAGTTGTTCTCAATTCCAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCGGGACATGGTCGTTTTCGTCTTCGACATCCTTGGACGCAGTACTTGAAGATTGGAGCACTTACTCGAGAATGTGCTTACAAGATTGAAACTCTTAACAACTACCTTAGTCCGAAAATCCCTACATCTTTGGAATTTAAGTGTAAAATTCAAGAACCATGCACAAAGATGATTTCAGAATCAAACAAGGCATTAAACGTGATATCTTCCTCCATCAAAACAATGACATATCCATCAGCTGCTAAAAGCCACATCGAAAATGCAAAAACTGCAGTTGAAGAGTTCAAATTTGCCCTTGAAACTGTTTCTTTGGAAGAAGCTGAACTCCTATCCATAATCCCAGTTGCTACAGTAGCTTCAATACTCGAAGAAATCACCAAGTCAGTGGAGAAAATATACGAGTCTGTTTCCGAGCTTTCTAACTTAGCCTACTTCAAGAGTGTTGCAGAATCCAATGTGTCACCAGAGAAGCCACACTTTCTTCATCGAGGTATCATAAAACCTATTATGGATATTGAAAACACAGTCGATCACGATACAATCACGATCCCAGAGATAACCACAGATTCGCCAGAAAAAGAAAAGATAGCAACAAAATCCTCCGAACATATGTAA 1449 0.3982 MDIESTMEANKGGFFAHWKNCLKALLRNIKSMIINFMKSITKIGKDDPRRVFHSLKVAFALTLVSLIYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLCKSLNRGCATLLAGALGVGGQHLASAFGEREKPIVLGILVFILAAGATFFRFFPKIKARYDYGLVIFILTFCLVAVSGYRVEELFELAHQRLSTILIGVTACMIISIFICPVWAGEDLHKLVASNIEKLSNYLQGFEVEYFHCSEDKEKCEKSVLEGYKVVLNSKASEESLANLARWEPGHGRFRLRHPWTQYLKIGALTRECAYKIETLNNYLSPKIPTSLEFKCKIQEPCTKMISESNKALNVISSSIKTMTYPSAAKSHIENAKTAVEEFKFALETVSLEEAELLSIIPVATVASILEEITKSVEKIYESVSELSNLAYFKSVAESNVSPEKPHFLHRGIIKPIMDIENTVDHDTITIPEITTDSPEKEKIATKSSEHM 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02256 482 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
Vimu6g02256 482 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 25 430 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02256 Vimu-Chr6 19734569 19736739 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02256 1 458 Miscellaneous Gene Families AT3G11680 55.411 1.08e-169 485
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02256 K25841 - gmx:100170704 787.334
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02256 6 19734569 19736739 Vimu6g02256 6 19734569 19736739 ECH
Vimu6g02256 6 19734569 19736739 Vimu3g01646 3 30575525 30578797 PCT