LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu6g02218	ATGGATTTGGAATCTTCTGGGGATTCGGTGAAATGTTGCAAGCACTGCGAATGTGGGTGTAGTGATTGCTCCATGGCAGCGCAATCTTCAAGGAATTGGTCCCGTTGTGTGAAAAGGAAACACAAGGAGTTGGAACGGGGCGGGCAATTCTCTGTGCCGGGGCCGGATTGCGATCCAGTGGCGCGTGTTGACATTGGAAATGAATGTGAAGCTTTACGGCAGGCTGTTAGCAGCCAACAACAATCAATACAGGATTTGTATGCTGAATTGGAGGAGGAGAGGAGTGCTGCCTCCTCGGCTGCGAATGAGACTATGTCAATGATATTAAGGTTGCAGAGGGAGAAGGCAGAGCTTCAGATGGAAGCGCGACAGTTCAAGAGATTTGTGGAGGAGAGAACGGTTTACGATCAGCAGGAGCTTCTGTTGTTGGAGGATATGTTGTATAAGAAGGAACAGGCTATTCACTCGCTCACCTGTGAGGTGCAGGCTTATAAGCACAGGTTGATGAGTTTTGGCCTCACTGAATCCGAGGCAGAAGGTGATCAGGATGAATTTCCCCCTTACGAGTACCCTCCTTTGAAATGTAAGGCAATGCATACTTGTGCTGATACGGACAATGATGACATAGACATTGATAAATATGCTTTTGGCGAAACTCCTAAGGACAGATTGAGGAACTTAGAAAGTAGGATATCTCAGATGGAGAGAAGCCCCACTTATAGCCAGGTGGATGGGGAATTTGGTGGCAAAAATATTTTTGAGAAGGTGATAGTTGGACAGTCTCCAAGACGGACCAAACATTCCAGGAAATTTTCTTGTGACTCGTCTTCACTGTGTCCGGAGTATATGGTGGATTCCCCTAGCTTTAGGAAGATGGATTCTCCCTCACAATTGGGGGACCTTCCCAACTTGAAGAAGATGGATAATGTATCAGAAGCTGGTGACGATATGATTGATAAAGTCTATACAATTGACTCCGAGTTCAAAACTGGAGTTAATGTTTGCGATGATTATGCAAGCACTCCAAAGGACTATGTTAATAACGCCGATTTTGAAGATCCATACGTAAAGAAGCTTTACATGAGACTTCAAGCACTTGAGGCTGATAGGGAATCAATGAGGCAGGCAATCATTTCCATGCGCACTGATAAAGCACAACTTGTTTTACTGAGAGAAATCGCTCAGGAATTGTGCAAAGAGATGTCAGAGCAAAAAAGAATGGCAGCGAGGTCCTTTATTGGCAGCTTCTCATTCTTGACAGTTTTCAAGGTGATTTAG	1278	0.4499	MDLESSGDSVKCCKHCECGCSDCSMAAQSSRNWSRCVKRKHKELERGGQFSVPGPDCDPVARVDIGNECEALRQAVSSQQQSIQDLYAELEEERSAASSAANETMSMILRLQREKAELQMEARQFKRFVEERTVYDQQELLLLEDMLYKKEQAIHSLTCEVQAYKHRLMSFGLTESEAEGDQDEFPPYEYPPLKCKAMHTCADTDNDDIDIDKYAFGETPKDRLRNLESRISQMERSPTYSQVDGEFGGKNIFEKVIVGQSPRRTKHSRKFSCDSSSLCPEYMVDSPSFRKMDSPSQLGDLPNLKKMDNVSEAGDDMIDKVYTIDSEFKTGVNVCDDYASTPKDYVNNADFEDPYVKKLYMRLQALEADRESMRQAIISMRTDKAQLVLLREIAQELCKEMSEQKRMAARSFIGSFSFLTVFKVI	425

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu6g02218	425	Coils	Coil	356	383	-	-
	Vimu6g02218	425	PANTHER	BNAANNG28530D PROTEIN	66	407	-	-
	Vimu6g02218	425	ProSiteProfiles	GTD-binding domain profile.	67	165	IPR007656	-
	Vimu6g02218	425	Coils	Coil	69	128	-	-
	Vimu6g02218	425	Pfam	Zein-binding	71	161	IPR007656	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu6g02218	Vimu-Chr6	19453167	19454444	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu6g02218	-		-	gmx:100797605	705.671

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu6g02218	6	19453167	19454444	Vimu6g02218	6	19453167	19454444	ECH
	Vimu6g02218	6	19453167	19454444	Vimu3g00248	3	2141229	2142545	PCT