Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02198 ATGGGTCGTTTGGCGACATTATCGGAAGAACCCATAAACGAACAAGAGAAGAGAAGCAGGTCGTGCAAGAAATGGCGGAACTGGAACTGGATAAAGACGCACTTCTTCCACAAGAAACCTGACCTAAAGATCTTACTCAGCGTTCTCGCTTGCCCTCTCTTCCCTGTCCCTCCCCACTCCAAACCCCACGCCCCCCTCAACCAGCTCTCCTCCTCCGCTCAGTATATCATCCAACACTTCACCGCCGCCACCGGCTGCCGCAACCTCCCCACCACCGTCACAAATGTCTTCGCCACCGGTAAGGTCGAAATGTGGGTCGTTGACGACGTCGGCAACACTGGAGTCTCCGAGAGAGGCTGCTTTGTCATATGGCAAATGCTCCCCGACAAGTGGCAGATTGAGCTCGTCGCAGCAACTCAGAAGGTTGTCGCCGGTAGTGATGGCACCGTCGCTTGGCGCCACACCCCCTGGATTGGCGCACACGCCGCCAAAGGCGGCGTCCGTCCTCTTCGTCGCGCCGTTCAGGCAAGTTCAATCGGACTGGACCCATTGGCAGTGTCTGCTGTATTCTGTGCGGCGCAATACATGGGAGAAAAAGAAATCTCAGGCATGGATTGTTTCGTGCTAAAGCTTTCAGCAGATCAGAAGGACCTGGTTGACCGGAGTGACAACACTGCTGAGATGATAAAGCACGTTGCATTTGGTTACTTCAGCCAGAGAAATGGACTACTGGTGCACCTAGAGGACTCTTACCTCACCAGGATTCAATCCCCTGGGACGCACCCCACCTATTGGGAGACCACAATGTCAACAAAAATTGATGATTACCGAATGGTGGATGGTGTGATGATTGCACATGCTGGCCATTCAACCGTGATCATCACAAGGTTTGGAGACAATCTAAAGACAGGCCCTGCCATCACGCGGTTGGAAGAGTCGTGGACCATTGATGATGTTGCATTCAACGTCCAAGGCCTGTCCATGGACTGCTTCATACCCCCCAAAGAACTCAACAAAGACTACCCTCAAGAACATCTAGATTGGAGATCACCCTTGCATACATGA 1065 0.5277 MGRLATLSEEPINEQEKRSRSCKKWRNWNWIKTHFFHKKPDLKILLSVLACPLFPVPPHSKPHAPLNQLSSSAQYIIQHFTAATGCRNLPTTVTNVFATGKVEMWVVDDVGNTGVSERGCFVIWQMLPDKWQIELVAATQKVVAGSDGTVAWRHTPWIGAHAAKGGVRPLRRAVQASSIGLDPLAVSAVFCAAQYMGEKEISGMDCFVLKLSADQKDLVDRSDNTAEMIKHVAFGYFSQRNGLLVHLEDSYLTRIQSPGTHPTYWETTMSTKIDDYRMVDGVMIAHAGHSTVIITRFGDNLKTGPAITRLEESWTIDDVAFNVQGLSMDCFIPPKELNKDYPQEHLDWRSPLHT 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02198 354 PANTHER LIPASE 4 339 IPR006873 -
Vimu6g02198 354 Pfam Protein of unknown function (DUF620) 97 334 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02198 Vimu-Chr6 19301571 19303834 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02198 - - gmx:100800778 653.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02198 6 19301571 19303834 Vimu3g00270 3 2468389 2470198 PCT