Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g00270 ATGCCACCGATTTCATCATGTTACCATGTGATTGCTGTGTCATCTTCGGCACAGTACATTATACAACACTTCAGGGCTGCAACAGGGTGTAAGAAGCTGGAGGGGACAGTGAAAAATGTGTTCACAACGGGGAAAGTGACAATGGATGTGGTGGATGATCTTGGATCCACCAATGGTGGTAATAATTTGGAGAAAGGATGTTTTGTGATGTGGCAGATGGTTCCAGATAAGTGGCAGATAGAGCTGGTTTTGGGTGGTCAAAAGGTTCTGGCTGGTAGCAATGGTGCCATTGCTTGGCGCCACACCCCTTGGCTCGGCGTGCACGCCGCCAAAGGCGGTGTCCGTCCACTTCGCCGTGCACTTCAGGCAAGTTCTTCTTCACCTTCATCATCATCACCAACACAATACATGGGGGAGAAACAAATCTCAGGCATGGAGTGTTTTGTGCTAAAACTCTCAGCTGATCAAAAGGACCTTGTTGAACGCAGTGACAACACAGCTGAGATGATAAAGCATGCCATATTTGGTTACTTCAGCCAAAGAAGTGGACTTTTGGTGTTTCTGGAGGACTCTTATCTGACCAGGATTCAAGCACCAGGCTCTCATCCCACATACTGGGAAACCACAATGTCAACAAAAATTGAAGACTACAGAGTTGTGGATGGTGTGATGATTGCACATGCTGGCTCATCAACTGCACTTATCACCAGGTTTGGTGACAACCTCAAGACTGGACCAGCCATCACAAGGTTGGAAGAGTCTTGGACCATTGATGATGTTGCATTCAATGTTCCAGGCTTGTCCTTGGACTGTTTCATACCACCTCAGGAACTGCACACAGATTCTAGTTCAGATGATGATGTTTTCTATGCAAACTTGTAA 882 0.466 MPPISSCYHVIAVSSSAQYIIQHFRAATGCKKLEGTVKNVFTTGKVTMDVVDDLGSTNGGNNLEKGCFVMWQMVPDKWQIELVLGGQKVLAGSNGAIAWRHTPWLGVHAAKGGVRPLRRALQASSSSPSSSSPTQYMGEKQISGMECFVLKLSADQKDLVERSDNTAEMIKHAIFGYFSQRSGLLVFLEDSYLTRIQAPGSHPTYWETTMSTKIEDYRVVDGVMIAHAGSSTALITRFGDNLKTGPAITRLEESWTIDDVAFNVPGLSLDCFIPPQELHTDSSSDDDVFYANL 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g00270 293 PANTHER LIPASE 14 280 IPR006873 -
Vimu3g00270 293 Pfam Protein of unknown function (DUF620) 41 275 IPR006873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g00270 Vimu-Chr3 2468389 2470198 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g00270 - - gmx:100801654 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02198 6 19301571 19303834 Vimu3g00270 3 2468389 2470198 PCT