Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02179 ATTTTTGTTAGGGGAGAAGTTTGTTCAGAGAAGGAGAATATGGGTGAAACGATGAAGAAGGAACCGTCACAGTGGTGGTGGCTTGATAGTCAGAACACTACTAATCGATCCCCATGGCTTCAATCCACACTCTCTGAGCTAAATGTGAAGACAAGGGCAATGCTAAAGTTAATTGAAGAAGATGCAGATTCCTTTGCCAAACGTGCAGAGATGTATTACAAGAAGCGACCAGAACTTGTGAGCATGGTTGAGGATTTCTACAGGACACACCGCTCCCTAGCTGAGCGCTATGATCAAGTCAAACCTGATACCACTGGAATTGGACACCTCGTTACTGGGGGGTCACCTTTTGCTTCAGCCAAGTACCAGATAGAGAAGTTGATGTGTTTTTCAGATAATGGGTACGACACCTATTCTGAGCATTGTGATGTGTACGAGTCTGAGGAATCTGAAGTAGATGATCCCGAGCAGGAGGAAGAGGGGACCGAGTTTGTTCACAGCTGCACAAAAAAGGAGAAAGCTTCATCATTGGCCGTGAGTTATGAATTGCTGAAGCTGAGGGACGAAGTCAGAAGACTCAATGAAGAGGACAATGGTCATAGGGATCAAATCAAGGAGAAGAACACCATTTGTGAGGAAGTCAAGATGTTGAGGGAAGAAATAGGAAGGCTTAGAGATGAGAATGAGGAACAGAAGAAACAACTCAAACAGAAGGATGAAGAGAAGATAGATGTGATAAGACAGTTGAGTTTAGCAATAGATTTGCTGAAGCAGGAGAATGTGAAGATGAGAAATTTCATTACCAAGGACTCTACCCAGAAATGGAAGAAACCGTTTGATGAGATCAACAAACTTGTGGGAGCCTTTTCGATGAAGTTGTTCAGTGGTGCTCCGAGGAATCAGCCCAGCGTTGAGCTCTCAACATGTGGTCGCAAATAA 939 0.4398 IFVRGEVCSEKENMGETMKKEPSQWWWLDSQNTTNRSPWLQSTLSELNVKTRAMLKLIEEDADSFAKRAEMYYKKRPELVSMVEDFYRTHRSLAERYDQVKPDTTGIGHLVTGGSPFASAKYQIEKLMCFSDNGYDTYSEHCDVYESEESEVDDPEQEEEGTEFVHSCTKKEKASSLAVSYELLKLRDEVRRLNEEDNGHRDQIKEKNTICEEVKMLREEIGRLRDENEEQKKQLKQKDEEKIDVIRQLSLAIDLLKQENVKMRNFITKDSTQKWKKPFDEINKLVGAFSMKLFSGAPRNQPSVELSTCGRK 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02179 312 Coils Coil 207 248 - -
Vimu6g02179 312 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 23 104 IPR011684 GO:0003779
Vimu6g02179 312 PANTHER PROTEIN NETWORKED 4A 19 102 - -
Vimu6g02179 312 Pfam KIP1-like protein 25 98 IPR011684 GO:0003779
Vimu6g02179 312 Coils Coil 183 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02179 Vimu-Chr6 19166071 19167812 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02179 - - vum:124828101 576.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02179 6 19166071 19167812 Vimu6g02179 6 19166071 19167812 ECH
Vimu6g02179 6 19166071 19167812 Vimu3g01724 3 31384908 31388692 PCT