Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01724 ATGCACCTAAATGAGAAGACAAAGGCAATGTTAAAACTAATTGAAGAAGATGCAGATTCCTTTGCCCAACGTGCTGAGATGTATTACAAGAAGAGACCACAGCTTGTGAGCATGGTTGAAGACTTCTATAGGACACATCGATCATTAGCTGAGCGGTATGATCAAATCGCTGGAATTCGTCAGCAGAAGACTGGAGGATCCCCCTTTTCTCCACTCAAGCATCATCAACCAGAGAAGTTGATGAGTTTTGCAAATGACAGTTATGATAGCTGTTCTGAGAGTTGTGATGTGGAGGAGTCTGGGGAATCTGAAATTGATGATCCTGAGCAAGAAGAGGAATCTAAATTCGATAACTGTGCAGAACTGGAGGAAGTTCAGTTTGTGGCTGAAAATGATGTGATGGAAATTGAGAGACTTGGTGAAGAGAACAAGGATCATAAGGACCAGAACAAGCAGAAATATAACATTTACGAAGTAGTGATGTTGAGGGAAGAAATAGAGCAACTCAGAAAAGAGAACAGGGTTCAGAAGGATGAACTCAACCGGAAAAGCATCACTTTTGTTGAATTAATGATGCTGAGGGAAGAAATAGAGCAACTGAGAAAAGAGAATACAGCGCAGAAGGATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGCAGTGATATTGAGGGAAGAAATAGAGCAACTCGGTAAAGAGAATAGAGTTCTGAAGGATGAACTAAGCCAGAAAAGTATCATTTGTGATGAAGTAATGATGTTGAGGGAAGAAATAGAGCAATTCAGAAAAGAGAATAGAGCGCAGAAGCATGAACTCAACCAGAAAGATATCATTTGTGGTGAAGCAATGATGTCGAGGGAAGAAAAAGAACAACTCAGTAAAGAGAATACAGTTCTGAAGGATGAACTAAACCAGAAAAGTATCATTTGTGGTGAAGTAATGATGTTGAGGGAAGAAATAGAGCAATTCAGAGAAGAGAATAGAGCGCAGAAGCATGAGCTCAACCAGAAAGATATCATTTGTGGTGAAACAATGATGTCGAGGGAAGAAATAGAACAACTCAGTAAAGAGAATACAGTTCTGAAGGATGAACTAAACCAGAAAAATATCATTTGTGGTGAAGTTATGATGTTGAGGGAAGAAATAGAACAACTCAGAAAAGAGAATAGGGAGCAGAAGGATGAACTCAACCAGAAAGACAACATTTGCGGTGAAATAATGATGTTGAGGGAAGAAATAGAACAATTGGGAAAAGAGAATGAAGCGCTGAAGGATGAACTCAACAAGAAATATATCATTTGTGGAGAAATAATGATGTTGAGGGAAGAAATAGAACAACTCAGGAAATATAATAGAGGGCAGAAGAATGAACTCGACCAGAAAGGTAACAAGTGTGAAGTAACGATGTTGAGGGAAGACATTGAAGTATACACAAGAGAGAATAGAGTGAAGAATGATGAACAAAACCCAGAAGATAGCGTTTGTGGTGAAGTAGTGATGTTAAGGGAAGAAATAGAACGACTTGGAAAAGATGAAAGAGCACAAAAGGGTACCCTTTCTGGTGAAGTAATGAAGTTAAGGCAAGAGAATAGCGCGCAGAAGGACCACCTTAAGCAAAAGGACCAAGAGAAAATAGAGGTGATAAGACACCTTAGTTTAGCTATAGATATGCTGAAGCAGGAGAACGTAAAGATGAGAAGCTTCATTGCTAAGGAATCTGCCAACAAATGGAAGAGTCCATTTGGGTTTAAGAATTTCATGGGATCATTATCAGAGCAGTTGTTTAATGGAATTACAAAGAATCAACCTACTGTTGTAGCTCTCTAG 1830 0.3896 MHLNEKTKAMLKLIEEDADSFAQRAEMYYKKRPQLVSMVEDFYRTHRSLAERYDQIAGIRQQKTGGSPFSPLKHHQPEKLMSFANDSYDSCSESCDVEESGESEIDDPEQEEESKFDNCAELEEVQFVAENDVMEIERLGEENKDHKDQNKQKYNIYEVVMLREEIEQLRKENRVQKDELNRKSITFVELMMLREEIEQLRKENTAQKDELNQKDIICGEAVILREEIEQLGKENRVLKDELSQKSIICDEVMMLREEIEQFRKENRAQKHELNQKDIICGEAMMSREEKEQLSKENTVLKDELNQKSIICGEVMMLREEIEQFREENRAQKHELNQKDIICGETMMSREEIEQLSKENTVLKDELNQKNIICGEVMMLREEIEQLRKENREQKDELNQKDNICGEIMMLREEIEQLGKENEALKDELNKKYIICGEIMMLREEIEQLRKYNRGQKNELDQKGNKCEVTMLREDIEVYTRENRVKNDEQNPEDSVCGEVVMLREEIERLGKDERAQKGTLSGEVMKLRQENSAQKDHLKQKDQEKIEVIRHLSLAIDMLKQENVKMRSFIAKESANKWKSPFGFKNFMGSLSEQLFNGITKNQPTVVAL 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01724 609 Coils Coil 314 334 - -
Vimu3g01724 609 Coils Coil 376 431 - -
Vimu3g01724 609 Coils Coil 524 544 - -
Vimu3g01724 609 Pfam KIP1-like protein 3 54 IPR011684 GO:0003779
Vimu3g01724 609 Coils Coil 438 458 - -
Vimu3g01724 609 Coils Coil 190 217 - -
Vimu3g01724 609 Coils Coil 283 303 - -
Vimu3g01724 609 PANTHER PROTEIN NETWORKED 4A 3 548 - -
Vimu3g01724 609 Coils Coil 252 272 - -
Vimu3g01724 609 Coils Coil 159 186 - -
Vimu3g01724 609 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 1 60 IPR011684 GO:0003779
Vimu3g01724 609 MobiDBLite consensus disorder prediction 92 114 - -
Vimu3g01724 609 MobiDBLite consensus disorder prediction 91 114 - -
Vimu3g01724 609 Coils Coil 352 372 - -
Vimu3g01724 609 Coils Coil 221 241 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01724 Vimu-Chr3 31384908 31388692 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01724 - - vun:114191805 912.524
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu3g01724 3 31384908 31388692 Vimu3g01724 3 31384908 31388692 ECH
Vimu6g02179 6 19166071 19167812 Vimu3g01724 3 31384908 31388692 PCT