Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02118 ATGGCTCCTTCTTTCACCAACGCCAAAATCTTCTCTTCCTTCTTCGCCCATGGATTCTCCAACTCTCTCACTAGACGTGGGTACGCGGTGGCATCGCAGAACGCAACAAAAGGAGGAGTGGCTTCCGTGAGCTCCAAAATTGCAACAACGTCAGGGGAAGACAAAGGAGTGTCTCCCTACAAGGTTTCCTGGGTTCCAGATCCTGTCTCTGGCTATTACAAACCCGAGAACATTAACGAGGTTGATGTCGCTGAATTGCGCGCTACGCATTTGGCCAAAAAATTCAACAACTCGTCTCAATCAATTAATTAA 312 0.4776 MAPSFTNAKIFSSFFAHGFSNSLTRRGYAVASQNATKGGVASVSSKIATTSGEDKGVSPYKVSWVPDPVSGYYKPENINEVDVAELRATHLAKKFNNSSQSIN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02118 103 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 7 94 IPR004926 -
Vimu6g02118 103 Pfam Late embryogenesis abundant protein 1 91 IPR004926 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02118 Vimu-Chr6 18778715 18779107 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02118 - - vun:114180105 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02118 6 18778715 18779107 Vimu3g01786 3 32380932 32381956 PCT