Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01786 ATGGCTCTACAAATGAACGAACGGTTGTGGTGTGAAAGAGAGGAATTTTCTAAGGAGGCTCGCATACTTGTTTTAACTTCTTCATTCGCATCCGAGGAACAAGCTTTCCGCAGTTCAACTCAATCATCCATGGCTCGCTCTTTCACTAACGTTAAGGTTCTCTCTGCTCTTGTCGCCGACGGATTCTCCAACACTACCACCAGGGGGAATCTTGCTGTAACTGGCGGTGAAATGAAGGATAAAGAATTGGTAAAGTGGCATGGGTTTGCGGCGGCGGCGGCGGCGACACAAAGCGCAACCAGAGGAGGTGCCTCCATCGGCGGCAATATGGTTCCGAAATCAGGGGAAGAGAAGGTGAGAGGTGGTGAAAAGGTTTCGTGGGTCCCAGACCCTGTGACTGGTTACTACAGACCAGAGAACACCAACGAGATTGATGTTGCTGACATGCGAGCTACGAACCTCTTTGGTCAGTTATACGTTAGATGTATCTCGAAGTTCACAGAAGCTTCGGGGATTATCAAGTATGAGGCAATCTTCTACATCAGTTTTGTTTTGAGAACTCCTAACTATGCTTTTGCTGTATTCTCTTTGGAAAATAACAGGAGTTCTTTGTAA 615 0.4699 MALQMNERLWCEREEFSKEARILVLTSSFASEEQAFRSSTQSSMARSFTNVKVLSALVADGFSNTTTRGNLAVTGGEMKDKELVKWHGFAAAAAATQSATRGGASIGGNMVPKSGEEKVRGGEKVSWVPDPVTGYYRPENTNEIDVADMRATNLFGQLYVRCISKFTEASGIIKYEAIFYISFVLRTPNYAFAVFSLENNRSSL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01786 204 PANTHER LATE EMBRYOGENIS ABUNDANT PROTEIN 2-RELATED 49 154 IPR004926 -
Vimu3g01786 204 Pfam Late embryogenesis abundant protein 44 154 IPR004926 -
Vimu3g01786 204 MobiDBLite consensus disorder prediction 104 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01786 Vimu-Chr3 32380932 32381956 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01786 - - vun:114190398 162.925
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02118 6 18778715 18779107 Vimu3g01786 3 32380932 32381956 PCT