Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02069 ATGACAAAAACGGAGGAAGCAGCTCTGAAGGCAACTACTGATTCGGTAACAGCAGTTGTTGCTGCAAATGAGGATGTAAAACAGGCTTTTGCAGATGATTTGAGCTCGACAAGCTCTTCACCCTGTGAATGGTTCGTATGCGACGATGACGAGACTGCTACAAGATATTTTGTGATCCAGGGTTCCGAAAAGGAAGCACCATTGTCCTCTCTGCTTCCTGTCATAACGTTTGGCGCCCCATCCATAATGTGTGGAGGTGATAGTCTTCTTGACAAGCTAGGATTGCCACGGAGTCATGTTCAAGCAATCACAATGCACAGAGACATAGTACCACGAGCATTTTCTTGCAAGTACCCTAACCATATTGCAGAACTGCTAAAGGCTCTTAATGGCAACTTCCGCAATCATCCGTGCCTTAATAACCAGAAGCTATTGTATGCACCAATGGGTGAGCTCTTGATCCTACAGCCAGACGAGAAATTTTCGCCAAGTCATCATCTTTTGCCCTCAGGCAGTGGCCTATATCTTTTGAGTGGTCAGTTGTCAGAATCTAGTGACGCAGTAAAACAGATACGGGCAGCAAAGATGGTGTTCTTGAACTCACCACACCCACTTGAGATATTAAGTGACCGATCTGCGTATGGATCTGGAGGAACCATTCAGAGAGATCACGACATGAATTCGTACTTGAGATGTGTGAGAACCGTGATTCGCCAAGAACTTCACCAGATTCGCAAGGCAAGGAGAGAGCAAAGGCGGCGAAAGGTGTGGTGGCCAATGGTGGTCCCACGTGGGAGTGAGAGTGCGGCAGTTGGAGGGTCCATGATATCGGTGAATATGATTAACGACGAACCTTCTCTCTTTGGCATGATTGAGACTGGGAAAGAATCATTGAAAAGGTTGGGTAGTCTGGTTGCATCCCAACAGATGCAATTGTTTGTGGTGTTCCTGTTTCCTGCAAGGTTGTTACTGGTGGGAGCATGTAGCTTAATTAGCTTAAGATGA 1005 0.4647 MTKTEEAALKATTDSVTAVVAANEDVKQAFADDLSSTSSSPCEWFVCDDDETATRYFVIQGSEKEAPLSSLLPVITFGAPSIMCGGDSLLDKLGLPRSHVQAITMHRDIVPRAFSCKYPNHIAELLKALNGNFRNHPCLNNQKLLYAPMGELLILQPDEKFSPSHHLLPSGSGLYLLSGQLSESSDAVKQIRAAKMVFLNSPHPLEILSDRSAYGSGGTIQRDHDMNSYLRCVRTVIRQELHQIRKARREQRRRKVWWPMVVPRGSESAAVGGSMISVNMINDEPSLFGMIETGKESLKRLGSLVASQQMQLFVVFLFPARLLLVGACSLISLR 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02069 334 SUPERFAMILY alpha/beta-Hydrolases 70 155 IPR029058 -
Vimu6g02069 334 PANTHER PHOSPHOLIPASE A1 PLIP2, CHLOROPLASTIC 2 64 IPR043367 GO:0008970
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02069 Vimu-Chr6 18478181 18481566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02069 15 66 Acyl Lipid Metabolism Gene Families AT1G02660 73.077 3.24e-18 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02069 - - gmx:100788786 403.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02069 6 18478181 18481566 Vimu6g02069 6 18478181 18481566 ECH
Vimu6g02069 6 18478181 18481566 Vimu3g01830 3 33038067 33041220 PCT