Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02058 ATGGCAACCATGACTGGTGTTAGTCTTTCAAGCCCCAGAGTGTTGTTCAACGCATCTGGCTCACCCAAAAATGCGCACGCCTTAAAATTCGCACTTCCACTGCGCCAACCTATGCGACCGGGTGGTGTTCAGGTGGGTCGGGTGCTGAGGATCCAACCCGTTCGCGCAGCGCCGGATAAGATATCGGAGAAGGTGGAGGAGAGCATAAAGAACGCGCAGGAAGCGTGCGCGGGCGATCCGACAAGCGGCGAGTGTGTGGCGGCGTGGGACGAGGTGGAGGAGCTGAGCGCGGCGGCGAAAGACGCGAGGGACAAGCAAAAGGAAAAGGATTCGGACCCTCTGGAGACCTTCTGCAAGGACAACCCGGAAACCATAGAGTGCAAAACTTTCGATGAATGA 399 0.5714 MATMTGVSLSSPRVLFNASGSPKNAHALKFALPLRQPMRPGGVQVGRVLRIQPVRAAPDKISEKVEESIKNAQEACAGDPTSGECVAAWDEVEELSAAAKDARDKQKEKDSDPLETFCKDNPETIECKTFDE 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02058 132 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 4 131 IPR039314 -
Vimu6g02058 132 Pfam CP12 domain 61 131 - -
Vimu6g02058 132 SMART CP12_2 61 132 IPR003823 -
Vimu6g02058 132 MobiDBLite consensus disorder prediction 97 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02058 Vimu-Chr6 18399211 18400622 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02058 - - gmx:100812168 227.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02058 6 18399211 18400622 Vimu3g01848 3 33253769 33254164 PCT