Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu3g01848 ATGGCAACAATAGCAGCTGGTGTCAGTCTTTCCAGCCCAAGGACAGTATTTGCTAATGCCAAGGGATCAGACTCTGCACCAAAGGCCCACCCAATTAGGTTCCCACTCTTCAGGCCCACACATAAGTGGCCCGCTTTGGTTGGGGTGGGGAAGGCCCGGCCCATTCGTGCAACGCCGGAAAAGATAGCGGATAAGGTGGAGGAGAGCATAAAGAGCGCGGAGGAGACCTGCTCGGGAGGCGGGACTGACGCGGAATGCGCGGCGGCTTGGGATGAGGTGGAGGAGCTGAGCGCTGAGGCGAGCCACGCCAGAGCGAAGCAGAAGGAGTCTGACCCGCTGGAGAGCTTCTGCAAGGACAACCCTGAAACCGATGAGTGCCGCACTTATGATAATTAA 396 0.5783 MATIAAGVSLSSPRTVFANAKGSDSAPKAHPIRFPLFRPTHKWPALVGVGKARPIRATPEKIADKVEESIKSAEETCSGGGTDAECAAAWDEVEELSAEASHARAKQKESDPLESFCKDNPETDECRTYDN 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu3g01848 131 PANTHER CALVIN CYCLE PROTEIN CP12-2, CHLOROPLASTIC 6 131 IPR039314 -
Vimu3g01848 131 SMART CP12_2 62 131 IPR003823 -
Vimu3g01848 131 MobiDBLite consensus disorder prediction 97 131 - -
Vimu3g01848 131 Pfam CP12 domain 62 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu3g01848 Vimu-Chr3 33253769 33254164 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu3g01848 - - gmx:100814289 206.838
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02058 6 18399211 18400622 Vimu3g01848 3 33253769 33254164 PCT