Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02047 ATGGGTTCCATTAAAAACCTTCTCATCACCATCGTGTCCCTGACTTCGCTTTTACAATGCACCACCCACGCCTTCGTCCAATCGCCTTCTCCCTCCCCGTCTTCCTCCCAATCCCTCCTCCTAAACCCCAACAACATCCTCGGCGCAGCATCCAACACAGTCGACATCCTAGAATACTGCCAAGACACAGAGAACCCTGCGCTCTGCGCTGAAACCATTGCCCCATCCCTGGATGGCACCTTCGACCCCATCAAGGCTCTCGAGACCGAAATGGAAGCCACCTTTGCCCAAAGCAAGAAGGTCGCCAAGATCATCTCCGAGGCACTGAGAAACCCTAACACCGACCCAAGGGCACATGGCGCCCTCTCCATTTGCAAGTCTCAATACAAGAGCATTATGGAAACTGTGAACGATGCCGTGGAATTGTTGAACCAACAGAATGTGGTTGATGCTTATTACAAGTTCAGCTCCGTTCTCTCTGACCAATCAACCTGTGAGGACGCGTTTGTGGAATCCCCCGGAGTTACCATTCCCTTCTCCGATGAATCTCACACTGTCTATCAGCTTGGTGGGAACTGCTTGGCCATCATGGAAGGGATGGTTAATAATCGTAACCGTTTTATCTTGGTTTGA 633 0.5103 MGSIKNLLITIVSLTSLLQCTTHAFVQSPSPSPSSSQSLLLNPNNILGAASNTVDILEYCQDTENPALCAETIAPSLDGTFDPIKALETEMEATFAQSKKVAKIISEALRNPNTDPRAHGALSICKSQYKSIMETVNDAVELLNQQNVVDAYYKFSSVLSDQSTCEDAFVESPGVTIPFSDESHTVYQLGGNCLAIMEGMVNNRNRFILV 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02047 210 CDD PMEI-like_2 60 197 - -
Vimu6g02047 210 Pfam Plant invertase/pectin methylesterase inhibitor 58 196 IPR006501 GO:0004857
Vimu6g02047 210 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 58 200 IPR035513 -
Vimu6g02047 210 Gene3D Invertase/pectin methylesterase inhibitor family protein 56 200 IPR035513 -
Vimu6g02047 210 SMART PMEI_2 51 196 IPR006501 GO:0004857
Vimu6g02047 210 PANTHER PECTINESTERASE INHIBITOR-LIKE 12 197 - -
Vimu6g02047 210 NCBIfam pectinesterase inhibitor domain 49 198 IPR006501 GO:0004857
Vimu6g02047 210 FunFam Invertase/pectin methylesterase inhibitor family protein 53 200 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02047 Vimu-Chr6 18342766 18343767 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02047 - - vun:114163609 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02047 6 18342766 18343767 Vimu3g01854 3 33310881 33311953 PCT