Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02032 ATGGTTGTGTCTTCTCCAACATCCAGCAAGATAGCTTCCAATAAAACAAAGGCAATGGGAATCCCAACGATTGACCTATCCATGGAAAGGTCGCGGTTATCGCAAACTGTGGTGAAAACCTGCGAGGAATACGGTTTCTTCAGAGTGGTTAACCACAACGTGCCGAAGGAGGTTATTGCAAGATTGGAAGAGGAAGGTGCAGAGTTTTTCTCAAAACCCAGTCACGAGAAGCGTCGGGCTGGGCCCGCAAGCCCGTTCGGTTACGGCTTCACCAACATTGGGCCCAATGGAGATATGGGTGACCTGGAGTATCTTCTGCTTCATGCTAACCCTCTCTCCATCGCTCAGATATCCAAAACCATCGCTAACGACTCCACCAAGTTCAGTACGGTTGTGAAGGAATATGTGGAAGTAGTGAAAGAAGTAACGTGCGAGATTCTAGATCTGGTGGTTGAGGGGTTGGGGGTTGCAGACAAGTCTGGTCTTAGCCGTCTGATCAGAGATTTTGATAGTGATTCTGTTCTGAGGATGAATCACTACCCTCCACTGAAGGTGAAGTGGAAGGGTAACAAGAATAGCATTGGTTTTGGAGCTCATTCTGACCCTCAGATGTTGACCATCATGCGCTCAAACGATGTGGGTGGCCTTCAAATTTACACCCGTGAGGGCCTATGGCTTCCTGTTCCTCCTGATCCCACTAATTTCTTTGTCATGGTTGGCGATGTTTTGCAGGTTATGACAAATGGAAAGTTCATGAGCGTGAGACACAGGGCATTGACGAACACATCGGAGGCAAGGATGTCAATGATATACTTTGCAGCACCACCACTTGATTGGTGGATAGCTCCTCTGCCGGAGATGGTGTCACCGCCGGAAAATGAGAGTGTGTATAAGGGCTTCACATGGGCCCAGTACAAGGAAGCAACATATTCTTTACGCCTTGGAGATTCACGACTTGATCTCTTCAGGGCCCAGATAGATACCCATCTTCTCTCTTCCTCACAATCTCAGTTTCAATGTTAA 1023 0.478 MVVSSPTSSKIASNKTKAMGIPTIDLSMERSRLSQTVVKTCEEYGFFRVVNHNVPKEVIARLEEEGAEFFSKPSHEKRRAGPASPFGYGFTNIGPNGDMGDLEYLLLHANPLSIAQISKTIANDSTKFSTVVKEYVEVVKEVTCEILDLVVEGLGVADKSGLSRLIRDFDSDSVLRMNHYPPLKVKWKGNKNSIGFGAHSDPQMLTIMRSNDVGGLQIYTREGLWLPVPPDPTNFFVMVGDVLQVMTNGKFMSVRHRALTNTSEARMSMIYFAAPPLDWWIAPLPEMVSPPENESVYKGFTWAQYKEATYSLRLGDSRLDLFRAQIDTHLLSSSQSQFQC 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02032 340 Pfam non-haem dioxygenase in morphine synthesis N-terminal 21 94 IPR026992 -
Vimu6g02032 340 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 21 308 - -
Vimu6g02032 340 SUPERFAMILY Clavaminate synthase-like 13 316 - -
Vimu6g02032 340 Gene3D - 2 313 IPR027443 -
Vimu6g02032 340 Pfam 2OG-Fe(II) oxygenase superfamily 172 274 IPR044861 -
Vimu6g02032 340 FunFam Gibberellin 2-beta-dioxygenase 2 4 313 - -
Vimu6g02032 340 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 170 275 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02032 Vimu-Chr6 18197836 18201282 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g02032 19 323 Glycosyltransferase AT5G59530 27.301 3.96e-25 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02032 K04125 - gmx:100777233 558.525
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02032 6 18197836 18201282 Vimu6g02032 6 18197836 18201282 ECH
Vimu6g02032 6 18197836 18201282 Vimu3g01872 3 33624791 33628027 PCT