Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02004 ATGAAATCACCTAATGTGAAAGAATTACTAGAGAATCCTCAATTTCTTCAAAGTGGCTTGAAGGGATCTAGAGTGAGTGGGATGGAAGATTTTGCTAACAGCTTTTGCGGTTGGAGTTGGGAGGAGAACAAGTTGTTTGAGCTAGCTTTGGCAGTGGTAGATGAGCAACACCCTGAACGGTGGGAAGTGGTTGCAGCCATGGTTGGAGGAGAAAAAAGTGCAGGAGATGTTCAAGAACATTACGTCATCCTTCTCCAGGATTTACTCGTTATAGAATCTGGAAAACTGGACCATAAACTTGGGGAAGTTATGCCTGTTGTCTTAGTTGAGAGCAAGGAGTCCATATGCTTGTCCCACGACGATTCAAGCATGTAA 375 0.4373 MKSPNVKELLENPQFLQSGLKGSRVSGMEDFANSFCGWSWEENKLFELALAVVDEQHPERWEVVAAMVGGEKSAGDVQEHYVILLQDLLVIESGKLDHKLGEVMPVVLVESKESICLSHDDSSM 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02004 124 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 36 96 IPR044636 GO:0003700
Vimu6g02004 124 FunFam Transcription factor SRM1 31 98 - -
Vimu6g02004 124 SUPERFAMILY Homeodomain-like 38 93 IPR009057 -
Vimu6g02004 124 Gene3D - 37 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02004 Vimu-Chr6 17957190 17958987 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02004 - - var:108327847 239.58
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02004 6 17957190 17958987 Vimu3g01903 3 33978926 33982266 PCT