Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01982 ATGGATGCTTCTTGCGGGATTGCTGGATTCAAGTATGATTGCTTGCTTTTCGATATGGACGATACTCTCTACCCATTGAGCTCAGGTCTCAATTTGGCATGTCGGAAGAACATAGAAGAGTACATGATAAAACACTTGCATATGGAAGAAAGTGAAGTACCAAAGATTTGCCTGGACTTCTACAAGGAATATGGGACAACTATGGCAGGACTAAAGGCCTTCGGTTATGAATTTGATAATGATGAATTTCATGCCTACGTGCATGGAAGACTACCATACTGGAAACTGAAGCCAGATCCAGTGTTAAGGAACCTTCTGCTTTCCATGCCTCAGCGTAAAATAGTATTCACTAATGCAGATGAGGCTCATGCACACCGAGTGCTCAACAGATTGGGCTTGATAGAATGTTTTGACAGTGTCATATGCTTTGAAACGCTTAATCCTCCTGATCACACAGATGTACCAACTGATAATCGCGTGTTAGCATGGAGCAACTGTAACTCGTTGAACAAAGAAGATTGTAACCAGGTAGAGAGTGAATGCTTTAACTCCAAGACACAAATCCTCTGCAAACCCTCTGTTGAAGCCATTGAAGCTGCCATTAAGATTGCTAATGTAGACCCAAGGAAAACGTTGTTTTTTGATGACAGTGCTAGAAACATTGCAAGTGGGAAAGCTGCTGGACTTAACACAGTTATTGTGGGGCGCTCAGATTTGGTGCCGGGAGCTGACCATGCACTGAACAGCATTCATAACATCAAAGAAGCATTACCCGAGATATGGGAAGTTGAGGGAGACCACCAGCAAATGATCCAATCTCAAGCAGTTGAAACCATGGTCCTTGCATAG 849 0.4311 MDASCGIAGFKYDCLLFDMDDTLYPLSSGLNLACRKNIEEYMIKHLHMEESEVPKICLDFYKEYGTTMAGLKAFGYEFDNDEFHAYVHGRLPYWKLKPDPVLRNLLLSMPQRKIVFTNADEAHAHRVLNRLGLIECFDSVICFETLNPPDHTDVPTDNRVLAWSNCNSLNKEDCNQVESECFNSKTQILCKPSVEAIEAAIKIANVDPRKTLFFDDSARNIASGKAAGLNTVIVGRSDLVPGADHALNSIHNIKEALPEIWEVEGDHQQMIQSQAVETMVLA 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01982 282 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE 10 278 - -
Vimu6g01982 282 NCBIfam HAD-IA family hydrolase 188 234 IPR006439 -
Vimu6g01982 282 Gene3D - 73 261 IPR023214 -
Vimu6g01982 282 CDD HAD_5NT 14 236 IPR010237 -
Vimu6g01982 282 SUPERFAMILY HAD-like 11 259 IPR036412 -
Vimu6g01982 282 NCBIfam pyrimidine 5'-nucleotidase 13 234 IPR010237 -
Vimu6g01982 282 SFLD C1.5.3: 5'-Nucleotidase Like 12 263 IPR010237 -
Vimu6g01982 282 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 12 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01982 Vimu-Chr6 17777829 17779692 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01982 K18551 - gmx:100786323 502.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01982 6 17777829 17779692 Vimu3g01938 3 34373046 34378234 PCT