Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01935 ATGACACCCAACATCACCACCGTCACTGTCAATGGCAGCACTGAGCAAACCAAACGTGGTAGTAGCCGTGCCTTTGTGACTTTCCTTGCTGGAAATGGTGATTACATAAAAGGTGTTGTGGGTTTGGCCAAAGGGTTGAGAAAGGCCAAAAGCATCTACCCTTTGGTGGTGGCTGTGTTACCTGATGTTCCTGAGGAACATCGTCTGACCTTGAAATCTCAAGGTTGCACTGTCAGGGAGATCGAACCTGTGTATCCACCTGAGAATCAGACACAGTTCGCCATGGCTTATTATGTCATCAATTATTCCAAGCTACGTATCTGGGAGTTTGTGGAGTACAGCAAGATGATATACCTAGATGGTGACATCCAGGTTTTTGGAAACATTGACCACTTGTTTGATCTTCCTGATAACTATTTCTATGCGGTGATGGATTGTTTCTGCGAGAAGACTTGGAGCCACAGCCCTCAGTACAAGATCGGTTACTGCCAACAGTGCCCTGATAAAGTTCAGTGGCCCTCTCATTTGGGTCCTAAACCTCCTCTATATTTCAACGCTGGCATGTTTGTCTATGAACCTAATCTTGTCACTTACAGTGATCTTCTTCGAACTCTTAAAATCACCAAGCCCACTTCTTTTGCCGAGCAGGACTTTCTGAACATGTACTTCAAGGACAAGTACAAGCCTATACCAAACTTGTACAACCTTGTACTGGCCATGTTGTGGCGTCACCCCGAGAATGTTGAACTTGACAAAGTTCAAGTGGTTCATTATTGTGCTGCTGGGTCGAAGCCTTGGAGATTCACTGGGAAGGAGCAGAACATGGAGAGGGAAGATATCAAGATACTTGTGAAAAAGTGGTGGGAGATATATGAAGATGAGACACTAGACTACAATAACGACAACTTTGTCAATGTGCAACCTTTCTCTTCAGCACTGTCGGAGCCTGATGTCATTCCACTCGTTTCGGCACCTTCTGCTGCATAA 987 0.4519 MTPNITTVTVNGSTEQTKRGSSRAFVTFLAGNGDYIKGVVGLAKGLRKAKSIYPLVVAVLPDVPEEHRLTLKSQGCTVREIEPVYPPENQTQFAMAYYVINYSKLRIWEFVEYSKMIYLDGDIQVFGNIDHLFDLPDNYFYAVMDCFCEKTWSHSPQYKIGYCQQCPDKVQWPSHLGPKPPLYFNAGMFVYEPNLVTYSDLLRTLKITKPTSFAEQDFLNMYFKDKYKPIPNLYNLVLAMLWRHPENVELDKVQVVHYCAAGSKPWRFTGKEQNMEREDIKILVKKWWEIYEDETLDYNNDNFVNVQPFSSALSEPDVIPLVSAPSAA 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01935 328 FunFam Hexosyltransferase 21 299 - -
Vimu6g01935 328 SUPERFAMILY Nucleotide-diphospho-sugar transferases 26 296 IPR029044 -
Vimu6g01935 328 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 21 300 IPR029044 -
Vimu6g01935 328 Pfam Glycosyl transferase family 8 27 268 IPR002495 GO:0016757
Vimu6g01935 328 CDD GT8_Glycogenin 23 293 - -
Vimu6g01935 328 PANTHER GLYCOGENIN SUBFAMILY MEMBER 15 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01935 Vimu-Chr6 17414742 17417246 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01935 1 328 Glycosyltransferase AT1G56600 75.221 0.0 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01935 K18819 - gmx:100800249 592.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01935 6 17414742 17417246 Vimu6g01935 6 17414742 17417246 ECH
Vimu6g01935 6 17414742 17417246 Vimu3g01998 3 34857702 34859102 PCT