Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01928 ATGGCTCTGGTAGCAGAGGATGTCAAGAGCAGATCGGAAGTGTACCACGGGGACGAAATCTGCCAAGTGAAGTCGAAAGAGCTGCTCAAGGAAATCGCTCTCCCCAATGGTCTCTTGCCCCTCAAAGACATAGAAGAGTGCGGTTACGACCGAGAAACCGGCTTCGTCTGGCTCAAACAGAAGAAGAGTTACACTCACAAGTTCGAAAAAATCGGTAAACTTGTGTCCTACGCGCCGGAGGTCACTGCTCATGTAGAAAAGGGAAAGATCTCCAAGCTCACCGGTGTGAAGACGAAGGAGCTCTTGCTCTGGATCACGCTCAGTGACATCTACGTCGATGACCCTCCCACCGGAAAAATCACCTTCAAAACCCCCGCTGGGCTATTTCGGTCTTTTCCTGTCTCCGCCTTCGAGATTGAGGAGGAGGCTCAGGCGAGTAAGCGCGTGGAGGAGCCTGCTGCGGCTGTGCAAGTCAAAGAGGTCTGA 486 0.5288 MALVAEDVKSRSEVYHGDEICQVKSKELLKEIALPNGLLPLKDIEECGYDRETGFVWLKQKKSYTHKFEKIGKLVSYAPEVTAHVEKGKISKLTGVKTKELLLWITLSDIYVDDPPTGKITFKTPAGLFRSFPVSAFEIEEEAQASKRVEEPAAAVQVKEV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01928 161 SUPERFAMILY At5g01610-like 5 142 IPR036758 -
Vimu6g01928 161 Pfam Protein of unknown function, DUF538 26 138 IPR007493 -
Vimu6g01928 161 Gene3D - 7 149 IPR036758 -
Vimu6g01928 161 PANTHER T31J12.3 PROTEIN-RELATED 13 140 IPR007493 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01928 Vimu-Chr6 17379728 17381519 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01928 - - gmx:100306660 284.648
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01928 6 17379728 17381519 Vimu6g01928 6 17379728 17381519 ECH
Vimu6g01928 6 17379728 17381519 Vimu3g02004 3 34906058 34907228 PCT