Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01837 ATGTGTGGGGGTGGAATAATAATAATACGCCGTGGAGGAACGGTAATGGCTCAAAGCAGCTCTGATGAGGATACTGATATTAGTGAATCTGAAATCAGCGAGTACGAAGATAAATCCTATGAAGAACTGAAAAGTGGAAGTCAGAATTTAAAAACATCGGATGAGAGTTTCACTTGTCCGTATTGCCCTAAAAAGAGAAAACGGGATTATTTGTACAAGGAGCTCCTTCAACATGCTTCTGGGGTGTTCCATCAAATGATTCAAAACCGGAAGATGAAAGTGGTTCTTCTGTTAATTCTAATGATCAGTTTGTGTGGCCTTGGATTGGAGTTGTAG 336 0.4018 MCGGGIIIIRRGGTVMAQSSSDEDTDISESEISEYEDKSYEELKSGSQNLKTSDESFTCPYCPKKRKRDYLYKELLQHASGVFHQMIQNRKMKVVLLLILMISLCGLGLEL 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01837 111 PANTHER RIBONUCLEASE P SUBUNIT P38 20 93 IPR045177 GO:0080188
Vimu6g01837 111 Pfam XS zinc finger domain 59 82 IPR005381 GO:0031047
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01837 Vimu-Chr6 16599025 16599847 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01837 - - gmx:100812353 110.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01837 6 16599025 16599847 Vimu6g01837 6 16599025 16599847 ECH
Vimu6g01837 6 16599025 16599847 Vimu1g01045 1 7774703 7781147 PCT