Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01833 ATGGTGTCGAAGAAGAGGGTAGATTATGGATTTAATGGCTTTCGAGTTCCTGTTATACCTAAAGCTCCTAGATCTGTAAGGAGGAGGGGTCCTTTCAACAAAGCCGCAGAGGATGGTCGAGTCTGTGCTATTGAACTACTGGCATCTTTAGCTGGTCAATTGCTGCAGGAGAGTGAAAGTTCTGCTTCCAGCAACGCATCTGAAGGAAATAATCAACCTGCCTTTAGCCAAGGTGTCATTGAGCAAGACAGACAGGATGAAATTAAACCATTAAAAAAGGAGGAAATTCACCAGGGAAGTTGTGCTGAGAGCACTATTAAGACTGAGGTAGGGTCACAAAACAGTAGCCAGAAACCTCCTCCACATTCCAAGACTGATTTTTCACAAGGGCACGTTTCGGTTAATAATGGTTCTGACATTTGTGAGAAAGTTGAAGGTGATGTGAAGTCTGAAATTTTCAAATGGGATAATAAATTTGGGAATTATTCTAATAGATTAGTAAAAACATCTGAAAAGTTTAGGGAGTCTAGTGATGGTAAGATGAAGAATGGATTTAAACAGGAACAAGAAGCTGGCAGTTCCTGCTTTAGGGGATCAAATTTGGCTGATAAATGTAGTTTGAAAGACCACTTAGAATTGTATGTATCTCCTACACTAATTAACTCAAAAAGTAATATTAAATCTCCCTTTCATAGGAAATCTTCTCCCAGTGCTTCCTTTTCCAGGCGTGGGAATGTTGTTAAATTAGGTTTTAGAGATGATGACGAAAACTTTTTAAGGTGCAAAAGAGTTTGCACAAAGTCAAAGGCCTTTAGGTCTCCAAGACGCATTGCGCACCGAAGAATCAGGAATTTGATGTCTTCTAAATACTGGAAGACTGCTCCAAAGCTGAAAGACTGTGAACTTTCTAGATCTGTAATATGGAATTTTGCAGATTTAGGAGTACCTCACTATAATAAGAGGAAGACTTGCTATGGTTTTGAAAGATTTCAGAACAACACTTTTATTAAGAAGAGGAAAATCGTTGATCGGGTTTCAGGAGTAACTTCTGATGGAGGATTCAGCAGTGAGAGTGTGTCCAATTCACCTCAGAAAGGGACGGATGGAGACAAGCCTAGCTCATCTGCAAAACTGCATGTAGCTAAGGCTAAGGATTCCCACGTAAAGTTTAGCATTAAGTCGATAAGGATACCAGAGCTTTATATTGAGGTTCCCGAAACTGCAACTGTTGGTTCGCTAAAGAGGACAATCATGGAGGCGGTGATGGCTATACTTGGAGGGGGTGCACATGTTGGTGTTCTTCATCATGGGAAAAAAGTCAGAGATGACGGTAGGACACTTGTGCAGACCGGTATATCTTGCAACGAAAATTTGGATACCCTGAGTTTCATGTTGGAGCCCGTTTCTCTTCAAGCTTCTCCAACCATTTGTGCTGGTGATCCCTCTTCTCAATGTGAAACATCCCAGCTCACTAGGCCCATAGAAACTCCTGCCTTAGATTCAGAGATTACTGATACCTTGCATGACTCACCCTTGCTGACATATCCGAGCAACCTAATTGAAAGTAACCACGAGACTACTTCTTCACTCGCCGACACAACAGTTGACAAAATAACACCTGATTGCAGAGCGCTGGTTCCCGTTCCAGCTAGCACGGAAGCATTAGCTGTGGTTCCTCGTCGAACCAGGAGACCATTTTCTGTGACTGAGGTAGAAGCACTTGTTCACGCAGTTGAGGAACTTGGAACTGGGAGGTGGCGTGATGTTAAGCTGCGAGCTTTTGAGAATGCAGACCATAGGACATATGTGGACCTAAAGGATAAATGGAAAACACTGGTGCACACTGCAACAATCTCCCCTCAGCAAAGGAGAGGAGAACCAGTGCCTCAGGAGCTCTTGGACAGAGTTTTGGCTGCTCATGCATTCTGGTCTCAGCACCAAGCCAAGCAGCATGGGAAACATCAAGCTGGATCTGGAACCTTGAAGATTACAGAAGCCTCAGCTGAAAGACCGTGTGTTTGTTGA 2025 0.4311 MVSKKRVDYGFNGFRVPVIPKAPRSVRRRGPFNKAAEDGRVCAIELLASLAGQLLQESESSASSNASEGNNQPAFSQGVIEQDRQDEIKPLKKEEIHQGSCAESTIKTEVGSQNSSQKPPPHSKTDFSQGHVSVNNGSDICEKVEGDVKSEIFKWDNKFGNYSNRLVKTSEKFRESSDGKMKNGFKQEQEAGSSCFRGSNLADKCSLKDHLELYVSPTLINSKSNIKSPFHRKSSPSASFSRRGNVVKLGFRDDDENFLRCKRVCTKSKAFRSPRRIAHRRIRNLMSSKYWKTAPKLKDCELSRSVIWNFADLGVPHYNKRKTCYGFERFQNNTFIKKRKIVDRVSGVTSDGGFSSESVSNSPQKGTDGDKPSSSAKLHVAKAKDSHVKFSIKSIRIPELYIEVPETATVGSLKRTIMEAVMAILGGGAHVGVLHHGKKVRDDGRTLVQTGISCNENLDTLSFMLEPVSLQASPTICAGDPSSQCETSQLTRPIETPALDSEITDTLHDSPLLTYPSNLIESNHETTSSLADTTVDKITPDCRALVPVPASTEALAVVPRRTRRPFSVTEVEALVHAVEELGTGRWRDVKLRAFENADHRTYVDLKDKWKTLVHTATISPQQRRGEPVPQELLDRVLAAHAFWSQHQAKQHGKHQAGSGTLKITEASAERPCVC 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01833 674 MobiDBLite consensus disorder prediction 350 378 - -
Vimu6g01833 674 SUPERFAMILY Ubiquitin-like 384 463 IPR029071 -
Vimu6g01833 674 MobiDBLite consensus disorder prediction 58 82 - -
Vimu6g01833 674 MobiDBLite consensus disorder prediction 101 132 - -
Vimu6g01833 674 CDD SANT_TRF 564 614 - -
Vimu6g01833 674 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 559 617 IPR017930 -
Vimu6g01833 674 ProSiteProfiles Myb-like domain profile. 558 613 IPR001005 -
Vimu6g01833 674 MobiDBLite consensus disorder prediction 58 79 - -
Vimu6g01833 674 Gene3D - 552 655 - -
Vimu6g01833 674 PANTHER TELOMERIC REPEAT BINDING PROTEIN 1 655 IPR031105 -
Vimu6g01833 674 SUPERFAMILY Homeodomain-like 564 645 IPR009057 -
Vimu6g01833 674 MobiDBLite consensus disorder prediction 94 132 - -
Vimu6g01833 674 MobiDBLite consensus disorder prediction 350 371 - -
Vimu6g01833 674 SMART sant 562 615 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01833 Vimu-Chr6 16575367 16578251 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01833 - - gmx:100795471 1103.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu4g00498 4 3620794 3628813 Vimu6g01833 6 16575367 16578251 ECH
Vimu6g01833 6 16575367 16578251 Vimu6g01833 6 16575367 16578251 ECH