Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01799 ATGACTGGCGATTTTCTTCGGACACTGTTCTCTCTCAAGATAGCCGTCTTCTTCTTCATCGCCGTCACCTTCTTCTACTTTGGCAAGCATTGGTCCGATGGCTACAACCAGCTTGTGTTCTTCAACACTCAACGTTCCGACCCAGATCCGAACACGATCCCGGTCGTTACCATGTCACCGAATTACGCTAAATCCTTTAACCTCTCCGCCCTCATTGACCAGAACATAACCCAACCGGTGCCGGAAAATGTCCCGCCGCCTCCGCCGCGGGAGGCGTCGATCGAGCAAATGGGAATCCTGAACAATAATGGCACGATGACCAATGAGTTCGAGGTGGGGGATTTCGAACCCGGTATGGTGGATCACTGGGTGAACGAGTCCCAGGTTGGGAACGAAGGTTCTGTTTCTGATTCTGAATTTGGGAGGAAAAAGTTTGGGTTGTGCTCGCGCGAGATGAGGGAGTATATACCTTGTTTGGATAACGACGACGCGATTCGGAAGCTGCCTTCCACGGAGAAAGGGGAGAGGTTCGAGCGGCATTGCCCCGTGCAAGGTCAAGGGTTGAATTGCCTGGTTCCTGCACCCACTGGATACCGTACTCCTATTCCGTGGCCCAGAAGCCGAGATGAGGTATGGTTCAATAATGTTCCTCATACACGTCTTGTTGAAGATAAAGGAGGCCAAAATTGGATTTCTAGAGACAAGGATAAGTTTAAATTCCCGGGAGGTGGCACTCAGTTTATCCATGGGGCAAATGAATACTTGGACCATATTTCTAAGATGATTCCTGAAATTACCTTTGGTCGGCATATACGTGTTGTTCTTGATGTTGGTTGCGGGGTTGCTAGTTTTGGTGCATACTTACTGTCACGGAATGTTGTCACTATGTCTGTTGCTCCCAAAGACGTTCATGAGAATCAGATTCAGTTTGCTCTTGAGCGTGGTGTACCGGCAATGGCAGCAGCATTTGCAACTAGACGATTGTTGTATCCAAGTCAAGCTTTTGACATGATACATTGCTCACGCTGTAGAGTTAATTGGACTAGAGATGATGGGATACTGCTGCTTGAAGTAAATAGGATGCTAAGAGCGGGAGGGTACTTTGTCTGGGCTGCCCAGCCAGTTTATAAGCACGAAGAAGTTTTAGAAGAACAATGGGAAGAGATGCTTAATCTTACAACTCGACTCTGTTGGAATTTTTTGAAAAAAGATGGGTACATTGCAGTATGGCAGAAACCATCTGACAATAGTTGCTATACAAACCGTGAGGCAGGAAGTAAACCTCCACTGTGTGACCCAACTGATGACCCAGACAGTGTTTGGTATTGTGCTCTGGCCTTCCTGTACATTTCCATCAATCGAGATGATTATAGCCAAAAGTGGTATGTTGATCTAAAAGCATGCATCTCTGAATTGCCTAAGAACGGATATGGAGCAAATGTCAGTGAATGGCCAGCTCGTTTGCAAGCCCCTCCTGACAGGCTTCAAAGCATACAGCTAGATGTTTTCTCATCCAGAACTGAGATATTCAAGGCAGAATCTAGATATTGGAAGGAAATAATAGCAAGTTATGTTCGTGCTTTAAACTGGAAAAAGATCAGACTAAGAAACATTATGGACATGCGAGCAGGTTTTGGAGGATTTGCAGCAGCATTGATTGAGCAGAATTTTGAAAACTGGGTTATGAATGTGGTTCCTGTTAGTGGCCCAAACACTCTTCCAGTTATATATGACCGTGGTTTGATTGGAGTTATGCATGACTGGTGCGAGGCATTTGACACCTACCCAAGAACGTATGATTTATTGCATGCTGCCAACCTCCTTTCTGTTGAGAGGAAAAGATGCAATCTCTCATCCATTATGCTTGAGATGGATCGGATACTAAGACCTGGTGGACATGTATACATCCGTGATTCTCTTGAAATTATGGATGAACTTCAAGAGATTGGCAAGGCAATAGGCTGGCATGTGATGTTGCGAGACTCAGAGGAGGGGCCTCATACAAGTTCTACGGTATTGGTTGGTGAGAAGCACTTACTACGCTCCTGA 2049 0.4588 MTGDFLRTLFSLKIAVFFFIAVTFFYFGKHWSDGYNQLVFFNTQRSDPDPNTIPVVTMSPNYAKSFNLSALIDQNITQPVPENVPPPPPREASIEQMGILNNNGTMTNEFEVGDFEPGMVDHWVNESQVGNEGSVSDSEFGRKKFGLCSREMREYIPCLDNDDAIRKLPSTEKGERFERHCPVQGQGLNCLVPAPTGYRTPIPWPRSRDEVWFNNVPHTRLVEDKGGQNWISRDKDKFKFPGGGTQFIHGANEYLDHISKMIPEITFGRHIRVVLDVGCGVASFGAYLLSRNVVTMSVAPKDVHENQIQFALERGVPAMAAAFATRRLLYPSQAFDMIHCSRCRVNWTRDDGILLLEVNRMLRAGGYFVWAAQPVYKHEEVLEEQWEEMLNLTTRLCWNFLKKDGYIAVWQKPSDNSCYTNREAGSKPPLCDPTDDPDSVWYCALAFLYISINRDDYSQKWYVDLKACISELPKNGYGANVSEWPARLQAPPDRLQSIQLDVFSSRTEIFKAESRYWKEIIASYVRALNWKKIRLRNIMDMRAGFGGFAAALIEQNFENWVMNVVPVSGPNTLPVIYDRGLIGVMHDWCEAFDTYPRTYDLLHAANLLSVERKRCNLSSIMLEMDRILRPGGHVYIRDSLEIMDELQEIGKAIGWHVMLRDSEEGPHTSSTVLVGEKHLLRS 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01799 682 FunFam probable methyltransferase PMT3 250 413 - -
Vimu6g01799 682 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 130 445 IPR004159 GO:0008168
Vimu6g01799 682 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 190 392 IPR029063 -
Vimu6g01799 682 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 453 677 IPR004159 GO:0008168
Vimu6g01799 682 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 154 445 IPR004159 GO:0008168
Vimu6g01799 682 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 497 657 IPR029063 -
Vimu6g01799 682 Gene3D Vaccinia Virus protein VP39 251 417 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01799 Vimu-Chr6 16274085 16281998 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01799 - - gmx:100800414 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01799 6 16274085 16281998 Vimu6g01799 6 16274085 16281998 ECH
Vimu6g01799 6 16274085 16281998 Vimu1g01006 1 7283400 7284390 PCT