Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g01006 ATGCTCCTCAGGGAGCGGACTGGCACTCTCACTACCCAACCTCTAAAGGTTCCAAATGAAAAGATACCTAATAATATACCTTCTCCCCTGCCGTGTCTCCTGTGCGAGCCGTTTGACACATATCCGAGAACTTATGATTTACTGCATGCTGCGAACCTGCTTTCTGTTGAGAAGAAAAGATGCAATGTGTCATCAATTATGCTTGAGATGGATCGCATACTAAGACCTGGTGGACGGGCATACATCCGTGATACTCTTGCCATCATGGATGAGCTTATTGAGATTGGTAATGCCATGGGCTGGCATGTGTCATTGCGAGACACATCTGAGGGTCCTCATGCAAGTTATAGGGTCTTGGTTTGTGATAAGCGCCTTCGCGGTTAA 384 0.4688 MLLRERTGTLTTQPLKVPNEKIPNNIPSPLPCLLCEPFDTYPRTYDLLHAANLLSVEKKRCNVSSIMLEMDRILRPGGRAYIRDTLAIMDELIEIGNAMGWHVSLRDTSEGPHASYRVLVCDKRLRG 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g01006 127 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 35 124 IPR004159 GO:0008168
Vimu1g01006 127 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 35 123 IPR004159 GO:0008168
Vimu1g01006 127 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 34 97 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g01006 Vimu-Chr1 7283400 7284390 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g01006 - - gmx:100786553 181.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01006 1 7283400 7284390 Vimu1g01006 1 7283400 7284390 ECH
Vimu6g01799 6 16274085 16281998 Vimu1g01006 1 7283400 7284390 PCT