LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Vimu6g01789	ATGGAGGGCGAATCTTACACCATAAGCAACACCAGCCATTTGCTCGGTTCTGTTCCCGCTGTCGTAGCCGATGAAAAGAGTAGCACAGCTCGTAACGTCCCTTATGCAAGCATGCAAACATTCCCCCTTACCAATAGGGTTGACAAAGGACAGGGATATCAAATTTCTGGAACTCCAACTGAAGCATTTGGGCAACAACCAACAAGCTACTGGCTGAGAATCTTTAGTGTCTCATCCTACATGCAGTATTTCAACGTGGACACGGATGTTGTTGTAAACAGATTGTTGAGTTCCTTGAATCCAGTTGGCGGAGATTTTTTTAACAAGATAGATGCTAATCCTGATTTATACGGGCTAATATGGATCTCAACAACATTGGTTTTTGTACTTGCCTTACTTGGAAATATTGCCACATACCTTACGCAGAAACATGTGGATAACACTACTTCTTGGAGCTTTGATGTCAGCTTCGTAAGTACGGCTGCGTGGTGTATCTATGGTTATGTTATAGTGGTCCCGTTGGCATACTACTTTTTCCTTCAGTATATGGGTTCAAATGCTAACCTTATTCGGTTCTGGTGCATGTGGGGGTATTCGCTCACCATTTTCATTATGTCCTCTTTCATAGAACATGAGATGAGGAATACTAGCAACACACTCTCCAACATATCTAACACTTCTCGTGAATTTTTTCAGTTTCTATTGCTTGTTCCAGTTGGAATTCTTCGTTGGATCATAATAATCCTTACAGGCGTTGCTTCAGCTAGCTTTGTTGCCTTGAACCTAAGGTCTTTTATAGAAGGAAATGATGTTTCGGTGGCTGTAATTGCTGCATTTTTCTTGCAAATAGCTTTGGCTGTCTTCATCAAGGTTCGTTTCTTTGGATAA	888	0.4144	MEGESYTISNTSHLLGSVPAVVADEKSSTARNVPYASMQTFPLTNRVDKGQGYQISGTPTEAFGQQPTSYWLRIFSVSSYMQYFNVDTDVVVNRLLSSLNPVGGDFFNKIDANPDLYGLIWISTTLVFVLALLGNIATYLTQKHVDNTTSWSFDVSFVSTAAWCIYGYVIVVPLAYYFFLQYMGSNANLIRFWCMWGYSLTIFIMSSFIEHEMRNTSNTLSNISNTSREFFQFLLLVPVGILRWIIIILTGVASASFVALNLRSFIEGNDVSVAVIAAFFLQIALAVFIKVRFFG	295

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Vimu6g01789	295	Pfam	Yip1 domain	100	289	IPR006977	GO:0016020
	Vimu6g01789	295	PANTHER	UNCHARACTERIZED	36	294	IPR039765	GO:0005794\|GO:0016192\|GO:0031267

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Vimu6g01789	Vimu-Chr6	16214011	16219597	Dispersed/Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Vimu6g01789	K22940		-	gmx:100813483	392.504

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Vimu6g01789	6	16214011	16219597	Vimu6g01789	6	16214011	16219597	ECH
	Vimu6g01789	6	16214011	16219597	Vimu1g00997	1	7222840	7233378	PCT