Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01769 ATGGGAAGAGGAGACATTGAACTCGAAACAAACAAGGTCTATGACCACGATGATGTAGCAGACGTTGAAGTTCCAAGTACCGCTCACCAAATTAGCAGCGATTCATGGTTTCAAGTGGGTTTTATCCTCACGACTGGAATCAACAGTGCCTATGTGCTTGGATATTCAGGAACCGTTATGGTTCCATTGGGATGGACAGGGGGTGTGGTTGGTCTAGTTCTTGCTACCATAATATCACTCTATGCAAATGCTTTAATTGCTCATCTCCATGAATATGGAGGACAAAGACATATTAGGTATAGAGATCTTGCTGGATTTATTTATGGTAAAAAGACATATTCTCTCACATGGGCTCTGCAGTATATCAATCTTTTCATGATAAATACTGGCTACATTATTTTGGCTGGTTCAGCCTTGAAAGCTACTTATGTTCTATTAAGGGATGATGGTCTATTGAAACTTCCATATTGCATTGCCATAGCTGGACTCGTGTGTGCAATGTTTGCCATCTGCATTCCTCATCTTTCAGCTCTTGGAATTTGGCTTGGGTTTTCAACTATCTTCAGCCTAATATACATTATCATATCCTTTTTGCTGTCGCTTAAGGATGGACTACAATCCCCGCCTCGTGATTACAACCTTTTAGGAGATGGTTTCAGCAAAGTATTCACCATAATTGGGGCATCTGCAAACCTTGTGTTTGCATTTAATACGGGCATGCTTCCTGAGATACAGGCAACAATTAGGCAGCCAGTTGTGAAGAACATGATGAATGCACTGTACTTTCAGTTTACCGTTGGAGTTTTACCGTTGTACCTAGTTACGTTTACAGGATATTGGGCTTATGGATCTTCTACATCAGTGTATTTGCTTAACAGTGTAAATGGTCCAGTTTGGGTGAAAGCTTTGGCCAATATTACAGCCTTTCTTCAATCGATTTTTGCAAGCCCAATGTACGAGTTTTTGGATACTAAATATGGGATCAAAGGAAGCGCATTGAATGTTAAAAACATGTCATTTCGAATCGTGGTAAGAGGTGGTTACCTGGCTTTTAACACATTTGTGTCGGCTTTCTTGCCATTCCTTGGAGATTTCATGAGTCTAACGGGGGCGATAAGTACATTTCCCCTTACATTTATTCTTGCAAACCATATGTACCTTAAGGCAAAGAAGGACAAACTAACAAGCTCGCAAAAGCTATGGCATTGGTTAAACATTGGTTTCTTTTCCATCATGTCTATTGCAGCAACAATTGCTGCCATTCGACTTATTTCTGTAGACTCCAAAACATACCATGTTTTTGCTGATTTGTGA 1314 0.4018 MGRGDIELETNKVYDHDDVADVEVPSTAHQISSDSWFQVGFILTTGINSAYVLGYSGTVMVPLGWTGGVVGLVLATIISLYANALIAHLHEYGGQRHIRYRDLAGFIYGKKTYSLTWALQYINLFMINTGYIILAGSALKATYVLLRDDGLLKLPYCIAIAGLVCAMFAICIPHLSALGIWLGFSTIFSLIYIIISFLLSLKDGLQSPPRDYNLLGDGFSKVFTIIGASANLVFAFNTGMLPEIQATIRQPVVKNMMNALYFQFTVGVLPLYLVTFTGYWAYGSSTSVYLLNSVNGPVWVKALANITAFLQSIFASPMYEFLDTKYGIKGSALNVKNMSFRIVVRGGYLAFNTFVSAFLPFLGDFMSLTGAISTFPLTFILANHMYLKAKKDKLTSSQKLWHWLNIGFFSIMSIAATIAAIRLISVDSKTYHVFADL 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01769 437 PANTHER OS05G0424000 PROTEIN-RELATED 31 420 - -
Vimu6g01769 437 Pfam Transmembrane amino acid transporter protein 34 420 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01769 Vimu-Chr6 16048038 16050592 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01769 60 437 Organic Solute Cotransporters AT3G55740 75.718 0.0 599
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01769 K26247 - gmx:100778997 753.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01769 6 16048038 16050592 Vimu6g01769 6 16048038 16050592 ECH
Vimu6g01769 6 16048038 16050592 Vimu1g00954 1 6727528 6730339 PCT