Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01742 ATGAATCGGAGTTTCAGGGCTCAGGAGTCGCAAATGCACTCTGCCTTGAAGCGGAGGGAGCAGCAATTTGGGGGTTTTCGAGCTTCAGTGATGAAGGATAAGGAGGAGGAGCTAGCATTGTTTCTGGAGATGAAGAAGCGCGAGAAGGAACGGAGTGATCTTCTGCTTAATGGGTCTGAGGAGTTCGATGCACCTCTAGGGTTGAATGCCAGCTCAAATCCCATATTTAACATTTCTTCGTCTACACCGGCACCTGTGAGAAAGACTGGTGTTGATGATTTTCTCAATTCGGAGAATGATAAGAATGACTATGACTGGCTTCTCACTCCTCCTGGTACTCCTCTTTTCCCTTCTTTGGAAATGGAAAGTCGAAAGACTGTTATGAGTCAGCTTGGTACTCCAACCACACGTCCTGTAGCATTAAAATCCAGGTTAGCAAATCATCAGTCAGAGCCTGCTGGGAGGACTAATTTTGTATCTAAACAACCTGCTTCTTCTCCTGGGTTGAGCTCTTCAAGTGGGGGAACCAGGAGGCCTTCATCATCAGGGGGTCCGGGATCACGACCTGGAACTCCTTCTGGGCGCCCTACACTAACTGCATCTTCAAAATCATCAAGACCTTCAACACCTACACGGTCCACCATACCTTCAACTAGGTCCGTGGCAGCTGCATCCAAGAACACAGTTTCCACAACCAAGCCTGCAGTTTCTACCACAAAGCCTTTGAGTTCTGCCGCTAAGACTCCAGTCCCTGCCGCTAAATCCACAATTCCTTCAAGATCCTCTACGCCCATGTCAAGATCTGCTGCAAGATCTTCTACGCCTACTAGCAGACCCTCTTTACCTCCTTCCAGGTCCACATCAAGAGCGTCTACCCCAACCCGGCGACCCTCATTACCATCAAATGAACCCATCATATCTGCTTCTTCAGTTAAAGCTTCTTTGAGCCCCAAGCCAACTACTGTGACGTCAAGGCAGCCAACTCCTGTGACAACAAGAAAGCCAGCTCCTGTGAACTCAAGGCAGCCAGCAGTACCATCACGTGGCAGTTCACCAACAGTGAGATCAAGACCATGGAAGCCATCTGACATGCCAGGCTTTTCACTTGATGCCCCACCTAATTTGAGAACAACATTACCTGATAGGCCTCTGTCAGCAACTAGGGGTAGACCTGGAGCACCAACTTCTCGGTCTTCATCTGTTGAGCCTTCTTCTAGTGGAAGACCCAGGAGACAGTCATGCTCTCCTTCAAGAGGACGGACTTCCAATGGTGTTGTTCATATCAGTGGAAACTCTATGCCGGCAGTTAGTCGTGGGCGCTCCAAAGTAAATGACAATGTCAGTCCCGTTGTAATGGGCAACAAAATGGTTGAGAGGGTAATAAATATGCGAAAACTAGCACCGCCAATGATTGATGACAAAAACTCTCCGCGTAGTAATCTGTCCGGCAAGTCAACCTCATCTCCAGATAGCTCAGGTTTTGGAAGAACACTTTCAAAGAAGTCGTTGGATATGGCGATTAGGCATATGGATATAAGGAGAACCATTCCAGGCAATTTACGGCCATTAATGACAAATATTCCGGCATCTTCTTTGTATAGCGTGAGGTCTGGGTCTCATCATGGCCGAACAATCAGTGTTTCAGGCTCTCCACATGCCACAAGCAGTAATGCTAGTTCTGAACTGAGCGTAAACCAGAATGGAATTTGTTTAGATAGCAGTGAAGTAGATGATGATATTGGCAGTGAGAGATGTGGTCAATCCCCTGCTAGTGTTCGGGGAAGGTAA 1788 0.4776 MNRSFRAQESQMHSALKRREQQFGGFRASVMKDKEEELALFLEMKKREKERSDLLLNGSEEFDAPLGLNASSNPIFNISSSTPAPVRKTGVDDFLNSENDKNDYDWLLTPPGTPLFPSLEMESRKTVMSQLGTPTTRPVALKSRLANHQSEPAGRTNFVSKQPASSPGLSSSSGGTRRPSSSGGPGSRPGTPSGRPTLTASSKSSRPSTPTRSTIPSTRSVAAASKNTVSTTKPAVSTTKPLSSAAKTPVPAAKSTIPSRSSTPMSRSAARSSTPTSRPSLPPSRSTSRASTPTRRPSLPSNEPIISASSVKASLSPKPTTVTSRQPTPVTTRKPAPVNSRQPAVPSRGSSPTVRSRPWKPSDMPGFSLDAPPNLRTTLPDRPLSATRGRPGAPTSRSSSVEPSSSGRPRRQSCSPSRGRTSNGVVHISGNSMPAVSRGRSKVNDNVSPVVMGNKMVERVINMRKLAPPMIDDKNSPRSNLSGKSTSSPDSSGFGRTLSKKSLDMAIRHMDIRRTIPGNLRPLMTNIPASSLYSVRSGSHHGRTISVSGSPHATSSNASSELSVNQNGICLDSSEVDDDIGSERCGQSPASVRGR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01742 595 PANTHER GASTRIC MUCIN-LIKE PROTEIN 20 584 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 1 20 - -
Vimu6g01742 595 Coils Coil 31 51 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 467 497 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 148 447 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 254 357 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 148 245 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 534 572 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 391 447 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 534 595 - -
Vimu6g01742 595 MobiDBLite consensus disorder prediction 475 497 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01742 Vimu-Chr6 15844840 15850773 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01742 - - gmx:100783818 892.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01742 6 15844840 15850773 Vimu6g01742 6 15844840 15850773 ECH
Vimu6g01742 6 15844840 15850773 Vimu1g00920 1 6413474 6418679 ECH
Vimu6g01742 6 15844840 15850773 Vimu1g00920 1 6413474 6418679 PCT