Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00920 ATGGTAGCAACTACCAAGACCTCAGTTTCTTCAGCCAAGCCCGTGGTTTCTGCTACTAAGGCTGCAGTTTCTGTTGCTAAAACTTCTACAGTACCTGCTGCTAAAATCACAATTCCATCTAGATCCTCTACACCTTTGTCAAGATCTACTGCAAGATCTTCAACACCAACAACCAGAACTACCTTACCTGCATCGAGGCCTACTTCAAGGGCATCAACCCCAACTAGGCGGCCAACAACACCATCTAATGTACCGACTGTATCTTCTCCGTCTGTAAAGACTTCTTCAATCTCCAAGTCAGCTCCTGTGATGTCAAGGCAGCCAATAACATCACCTGGCACTTCACCAACTGTGAAGTCAAGCCCAAGACCATGGAAGCCATCTGAGATGCCTGGCTTTTCACTTGATGCGCCACCCAATTTGAGGACAACGCTTCCAGAAAGGCCACTGTCAACAACTAGGGGTAGGCCTGGAGCACCCAGTTCACGATCCTCATCTGTTGAGCCTCCTTCTATTGGTAGACCAAGGCGGCAATCGTGCTCTCCGTCTAGAGGACGTTCCTCCAATGGCATTTCTCATCCAACTGGAAGCTCTATGCCAGCAGTTAATCGTGGGTACTCCAGAGCAAATGACAATGTCAGTCCTGTTGTAATGGGCACCAAAATGGTTGAGAGGGTAGTGAATATGCGGAAATTGGCACCACCAAGGCTGGATGGCACGAACTCTTCCCATAATCTTTCTGGCAAATCATCTTCATCTCCGGATACCTCTGGTTTTGGAAGGTCACTCTCGAAGAAATCCTTGGATATGGCAATAAGGCATATGGATATAAGGCGAAGGGTTCCAGGCAATTTACGGTCATCAATGATGACGAACATTCCAGCATCTTCAATGTACAGTGTGAGATCTGGTTCTCAGCGTAGCCGCACTGTTAGTATCTCGGGCTCTCCTCATGCCACTAGCAGTAATGCTAGTTCTGAAGTGAGTGTAAACCCAAATGGTCTTTGCTTAGATAATAGTGAAATAGACGATGATATTGGCAGTGAAAGAAGTGGTCAATCTCCTGCCAGTGTGCGGGGTAGGTAA 1086 0.4733 MVATTKTSVSSAKPVVSATKAAVSVAKTSTVPAAKITIPSRSSTPLSRSTARSSTPTTRTTLPASRPTSRASTPTRRPTTPSNVPTVSSPSVKTSSISKSAPVMSRQPITSPGTSPTVKSSPRPWKPSEMPGFSLDAPPNLRTTLPERPLSTTRGRPGAPSSRSSSVEPPSIGRPRRQSCSPSRGRSSNGISHPTGSSMPAVNRGYSRANDNVSPVVMGTKMVERVVNMRKLAPPRLDGTNSSHNLSGKSSSSPDTSGFGRSLSKKSLDMAIRHMDIRRRVPGNLRSSMMTNIPASSMYSVRSGSQRSRTVSISGSPHATSSNASSEVSVNPNGLCLDNSEIDDDIGSERSGQSPASVRGR 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00920 361 MobiDBLite consensus disorder prediction 1 213 - -
Vimu1g00920 361 MobiDBLite consensus disorder prediction 1 122 - -
Vimu1g00920 361 MobiDBLite consensus disorder prediction 296 361 - -
Vimu1g00920 361 MobiDBLite consensus disorder prediction 296 336 - -
Vimu1g00920 361 MobiDBLite consensus disorder prediction 145 213 - -
Vimu1g00920 361 MobiDBLite consensus disorder prediction 238 262 - -
Vimu1g00920 361 PANTHER GASTRIC MUCIN-LIKE PROTEIN 5 351 - -
Vimu1g00920 361 MobiDBLite consensus disorder prediction 234 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00920 Vimu-Chr1 6413474 6418679 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00920 - - gmx:100812772 434.491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01742 6 15844840 15850773 Vimu1g00920 1 6413474 6418679 ECH
Vimu1g00920 1 6413474 6418679 Vimu1g00920 1 6413474 6418679 ECH
Vimu6g01742 6 15844840 15850773 Vimu1g00920 1 6413474 6418679 PCT