Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01739 TTGTCTTTACTGTGCAGACTAATGGGGAGATTGTTTGTGGTGAATCTGGAAGGGAAGATCTATAGCTGCAAACACTGTCATACCCATCTTGCTCTTTACGATGACATCTACTCAAAGGTTCCATCTTTATCCGTCCCCCTCTTTTCTCTCCTCTATATCTTTTCTGAGTATGACATTTTCAATCCCCTTCTTCTTCATTCATCTCTTGAAAATTCGAATGGATGGTCTTGCTTTTTTTTCATAAGAACACATTATCTGACTATCATTTTTTCCTTTGTTATATTCAGACATTCCACTGCAGACATGGGAAAGCTTATCTCTTCAACAAGGTGTAAGTTATCCTTACTCTGCGCATCTTACCACTGTGTGAATGTTTCTATTGGAGAAATGGAGGACAGACAGATGATAACAGGGTTACATACCGTGGCTGACATTTTCTGTGTGGGTTGTGGATCGATTGTGGGTTGGCAATATGAAACTGCCTATGAAAAAAACCAGAAGTACAAGGAAGGAAAATCCGTGCTTGAACGGTACAAAGTGTCAGGTCCGGATGGAAGCAATTATTGGATCAGTCATGAGGCACATGTTGGTGGAAGTGATGCAGATGATGCTTAG 615 0.4065 MSLLCRLMGRLFVVNLEGKIYSCKHCHTHLALYDDIYSKVPSLSVPLFSLLYIFSEYDIFNPLLLHSSLENSNGWSCFFFIRTHYLTIIFSFVIFRHSTADMGKLISSTRCKLSLLCASYHCVNVSIGEMEDRQMITGLHTVADIFCVGCGSIVGWQYETAYEKNQKYKEGKSVLERYKVSGPDGSNYWISHEAHVGGSDADDA 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01739 204 ProSiteProfiles Yippee domain profile. 87 184 IPR034751 -
Vimu6g01739 204 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 8 181 IPR039058 -
Vimu6g01739 204 Pfam Yippee zinc-binding/DNA-binding /Mis18, centromere assembly 20 181 IPR004910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01739 Vimu-Chr6 15832964 15835314 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01739 - - gmx:100305552 169.088
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01739 6 15832964 15835314 Vimu6g01739 6 15832964 15835314 ECH
Vimu6g01739 6 15832964 15835314 Vimu1g00919 1 6409490 6411875 ECH
Vimu6g01739 6 15832964 15835314 Vimu1g00919 1 6409490 6411875 PCT