Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00919 ATGTCTAGATCATCACCGCTTCAATTTGACCTTTGCTTTACCCTTCGTCTGAAAATCCCGGTTGATCTTCAGCCTAGAATTTTCCGAATTGAGCTATGGGGAGGTTGTTTGTGGTTCATCTCGAGGGGAAGGTCTATAGCTGCAAACACTGCCGTACCCATCTTGCTCTCTATGAAGACATCGTTTCCAAGCGTGAATGTTTCTGCTGGAGAAAACGAGGACAGACAGATGCTCACCGGGATGCATACTGTGGCTGACATTTTCTGTGTGGGGTGTGGATCAATTGAGACAGCTCATGAAAAAAGAGAGAAGTACAAGGAAGGAAAATCTGTACTTGAACGAACTGAGAAAACACTCTTAATACATGAAGTTCTTTGGAGACAAGTATCTGGTGGACTTAACATGTTTTTACTTATGGCCAGGTACAAGGTGTCAGGTCCTGATAGCTGCAATTATTGGGTCGGCCATGAAGCACATGGTGGAAGTGATGCAGATGACGCTTAG 504 0.4464 MSRSSPLQFDLCFTLRLKIPVDLQPRIFRIELWGGCLWFISRGRSIAANTAVPILLSMKTSFPSVNVSAGENEDRQMLTGMHTVADIFCVGCGSIETAHEKREKYKEGKSVLERTEKTLLIHEVLWRQVSGGLNMFLLMARYKVSGPDSCNYWVGHEAHGGSDADDA 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00919 167 ProSiteProfiles Yippee domain profile. 26 121 IPR034751 -
Vimu1g00919 167 PANTHER PROTEIN YIPPEE-LIKE CG15309-RELATED 63 116 IPR039058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00919 Vimu-Chr1 6409490 6411875 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00919 - - cic:CICLE_v10033070mg 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01739 6 15832964 15835314 Vimu1g00919 1 6409490 6411875 ECH
Vimu1g00919 1 6409490 6411875 Vimu1g00919 1 6409490 6411875 ECH
Vimu6g01739 6 15832964 15835314 Vimu1g00919 1 6409490 6411875 PCT