Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01725 ATGGAAGATCCCTCCAACCACCGCCGCTCCAAGAAGCACCACCGCCGCCACAACAGCCGCCACCCCGCCGCCACCAACACCACGGTGAGCACGACCACCGGGGAGTCAGACGTGGAGGTGGAGGAGGCGGAGGACGGCGACCCGGAGGTGTGGGCGACCCTGAACAAGGGGTTCCGGCAGGTGCAGTCGGTGCTGGACCGGAACCGGCAACTGATTCAGCAGGTGAACGAGAACCAGCAGTCTCGGATGCACGACAACATGGTAAAAAACGTGTCCCTCATTCAGGAACTCAACGGCAACATCTCCAAGGTTGTCTCTCTCTACTCTGATCTCAACTCCAATTTCACCAACGTTTGCCAACACCGCTCCAAAAACCCTTCCAAATAA 387 0.5866 MEDPSNHRRSKKHHRRHNSRHPAATNTTVSTTTGESDVEVEEAEDGDPEVWATLNKGFRQVQSVLDRNRQLIQQVNENQQSRMHDNMVKNVSLIQELNGNISKVVSLYSDLNSNFTNVCQHRSKNPSK 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01725 128 Pfam Early Flowering 4 domain 46 124 IPR009741 -
Vimu6g01725 128 MobiDBLite consensus disorder prediction 1 47 - -
Vimu6g01725 128 PANTHER PROTEIN ELF4-LIKE 4 28 124 IPR040462 GO:0042753
Vimu6g01725 128 MobiDBLite consensus disorder prediction 22 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01725 Vimu-Chr6 15734359 15734745 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01725 - - var:108328510 235.728
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01725 6 15734359 15734745 Vimu1g00914 1 6368963 6369283 PCT