Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00914 ATGAACAGAAACTCCTCCCGTCGTTCCCCCGCCACAGAATACGTCGGCGTCGATGGCGACCCCGTGGTGTGGGCGGCGGTCGATGAGAGCCTCCGCGAGGTGCAGTCGATGTTGGACCGCAACCGCCGCCTGATCGATGAGGTGAACGAGAATCAACAAACGAGGCTCCGCCACAACATGGTCAAGAACGTGTCCCTCATTCAGGAGCTCAACGGCAACATCTCCAAGGTCCTCTCTCTCTACTCCGATCTCAACTCCACTTTCTCCGCCGCTTTCCAGAACCACCACTCTGCCGCCAACGTCACCCCTGACAAATCGTGA 321 0.5857 MNRNSSRRSPATEYVGVDGDPVVWAAVDESLREVQSMLDRNRRLIDEVNENQQTRLRHNMVKNVSLIQELNGNISKVLSLYSDLNSTFSAAFQNHHSAANVTPDKS 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00914 106 Pfam Early Flowering 4 domain 20 98 IPR009741 -
Vimu1g00914 106 Coils Coil 27 51 - -
Vimu1g00914 106 PANTHER PROTEIN ELF4-LIKE 4 17 98 IPR040462 GO:0042753
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00914 Vimu-Chr1 6368963 6369283 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00914 - - sspl:121741602 122.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01725 6 15734359 15734745 Vimu1g00914 1 6368963 6369283 PCT