Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01696 ATGTGGTTACCATGGCGTGTCCGAACTACAGCTTCGCGTCCCAACCGATCCCGATCCCGAGCCTCCACCGTCTCCTGCACTTCCTTCAAAGACATCCAAACCCTCCTCGCTTCTGAACCCGAACCTAGCTCTCCCAAATCTCCCTCCCTTTTCCGCCGCCTCTCCGTCTCCCCCTCCCTCCTCCGTTCCCTCAGCGGCTCCCGCGCCACCGCCCCTTCCTCCTTCGCGCCGCCTCCGGACTCCGACTTTTCCTCCGTCGTCCTCTACTACACCAGCCTCCGCGTCGTCCGACGTACCCACGACGACTGCCGCGCCGTCCGATCCATCCTCCGCGGCTTCGCCGTCGCCATCGACGAGCGCGACGTCAGTGTCGACGAACGCTTCCGCGAGGAGCTGCAGGGGATTCTCGGCCGCCGCGCCGTGCCTCTTCCGAGCGTTTTCGTCGCCGGAGCCTACATTGGCGGCGCAGACGAAGTGCGGCGACTCTACGACAGCGGCGAGTTGCATGAGCTGATCGAACGGCTGCCGTTTTCGCGGAGCATCGCGTGCGGTCTCTGCGGAGGGCTGAGATTCGTTGTGTGCGACAAATGCGATGGAAGCCATAAAGTATTCGCTGAAAAGAGTGGCTCCTTCAGGATCTGTTCTTCCTGCAATTCCAATGGTTTGATCAGGTGCTCTTCCTGTTTCGTGGTGCACCAGCGACACAGCAAATAA 714 0.6148 MWLPWRVRTTASRPNRSRSRASTVSCTSFKDIQTLLASEPEPSSPKSPSLFRRLSVSPSLLRSLSGSRATAPSSFAPPPDSDFSSVVLYYTSLRVVRRTHDDCRAVRSILRGFAVAIDERDVSVDERFREELQGILGRRAVPLPSVFVAGAYIGGADEVRRLYDSGELHELIERLPFSRSIACGLCGGLRFVVCDKCDGSHKVFAEKSGSFRICSSCNSNGLIRCSSCFVVHQRHSK 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01696 237 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 25 228 - -
Vimu6g01696 237 SUPERFAMILY Thioredoxin-like 84 173 IPR036249 -
Vimu6g01696 237 Pfam Glutaredoxin 87 152 IPR002109 -
Vimu6g01696 237 CDD GRX_GRX_like 85 225 - -
Vimu6g01696 237 ProSiteProfiles Glutaredoxin domain profile. 74 179 - -
Vimu6g01696 237 Gene3D Glutaredoxin 82 174 - -
Vimu6g01696 237 MobiDBLite consensus disorder prediction 1 25 - -
Vimu6g01696 237 MobiDBLite consensus disorder prediction 10 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01696 Vimu-Chr6 15533034 15534415 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01696 K17479 - gmx:100807688 310.071
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01696 6 15533034 15534415 Vimu1g00875 1 5983652 5984395 ECH
Vimu6g01696 6 15533034 15534415 Vimu6g01696 6 15533034 15534415 ECH
Vimu6g01696 6 15533034 15534415 Vimu1g00875 1 5983652 5984395 PCT