Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00875 ATGTGGCCACCGTGGCTTAATTCGCCCAACCGGTTCCGCAACACTCCACCGCCGTCACCGTCACCCTCGTCATCGCCCTCGCATTCTCGATCTCGCTCATTAAGCTTCTCCTGCTCATCTTTCAAAGACATTCAGAGCCTCCTCCAAGAAAAGCCCGAATCCGGCCCCGCCGCTCCCAAATCTCCGTCGCTCTTCCGTCGCGTCCGGATCTCCACCGCCGTACTTCGCGCCTGGGGTGCCTCGCGCGCTACCGTCCCCGCTGCTCTTCCGCCCGGCCTTGACCAAGGAGTCGTCGTATACTTCACCAGCCTCCGCGTCGTCCGCCGCACTTTCGACGACTGCCGAGCTGTCCGATCCATCCTCCGTGGCCTCCGCGTCGCCGTCGACGAGCGCGACGTCTCCATCGATGACCGCTTCCGCGACGAACTTCACGCCGTTCTCGGCCGCCGCAGCCTCGCTCTGCCACGCGTCTTCGTCGGCGGAGTATACATCGGCGGCGCCGACGACGTTCGTCAACTTCACGAGAGCGGCGAGCTCCACCGCCTCATCGAACGGCTCCCGCGCTCGAATCAGAACGCTTGCGACTGCTGCGGAGGTTTCAGATTCGTAGTGTGCGATGAGTGCAACGGAAGCCACAAAATCTTCACCGAAAAAAACGGATTTCGAAGCTGTCCGTCTTGCAATCTCAACGGCTTGATTCGGTGCCCTGCTTGCTTCTTCGTGCACCCGCGCCACACCAAATAA 744 0.6156 MWPPWLNSPNRFRNTPPPSPSPSSSPSHSRSRSLSFSCSSFKDIQSLLQEKPESGPAAPKSPSLFRRVRISTAVLRAWGASRATVPAALPPGLDQGVVVYFTSLRVVRRTFDDCRAVRSILRGLRVAVDERDVSIDDRFRDELHAVLGRRSLALPRVFVGGVYIGGADDVRQLHESGELHRLIERLPRSNQNACDCCGGFRFVVCDECNGSHKIFTEKNGFRSCPSCNLNGLIRCPACFFVHPRHTK 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00875 247 MobiDBLite consensus disorder prediction 1 37 - -
Vimu1g00875 247 PANTHER GLUTAREDOXIN DOMAIN-CONTAINING CYSTEINE-RICH PROTEIN CG12206-RELATED 36 238 - -
Vimu1g00875 247 Pfam Glutaredoxin 98 164 IPR002109 -
Vimu1g00875 247 ProSiteProfiles Glutaredoxin domain profile. 85 190 - -
Vimu1g00875 247 SUPERFAMILY Thioredoxin-like 95 184 IPR036249 -
Vimu1g00875 247 CDD GRX_GRX_like 96 235 - -
Vimu1g00875 247 Gene3D Glutaredoxin 93 185 - -
Vimu1g00875 247 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00875 Vimu-Chr1 5983652 5984395 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00875 K17479 - gmx:100791927 412.535
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01696 6 15533034 15534415 Vimu1g00875 1 5983652 5984395 ECH
Vimu1g00875 1 5983652 5984395 Vimu1g00875 1 5983652 5984395 ECH
Vimu6g01696 6 15533034 15534415 Vimu1g00875 1 5983652 5984395 PCT