Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01695 ATGGTGACAGTAACAAAAGCAATGTGCTGGAGTGTTGTGGCTAAGACTCTGGACTCATCTGGTATTGGGCTTGTTATATACCAGAAACCTACCTCATCTTCTTGTTATCAGGAACGCAAAGAGAATACTCCTCCTTTATCACATGTTGTTCAAACGGAGACCATAGAAGAAAATGTTCACGAGCCAACCATAGCAAGCAATGCTAAGCATATTACTGTTACTGTTAGTTTAACTTCTATCCCTTCTGATTTTGTTTTCATGATTAGGTATGCCAAACTCAGTGGTTGCCTCATTCCTCTTCCAGTTGATGGTGAGGGTAACATTCAGAGCTGGCCAATGTCTTGGCCCCAAAGGCTTACTGGTATACCTCCAAGCTTATCGAGTGAATCAGATGTCACTGAGAAGTTCTTGAATGACACCAAGCACTGGTCTGAACTAGTTTCAGACGTTTATATAGATGGTCTTTCTATAAACTGGTCAAGTGTACGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCCGCGTCACTCATTGATCTACCAGTGTGGGTGATGAATGTAGTACCCATTGACATGCCAGATACTCTTACTACTATATTTGACCGAGGGCTAATAGGATTATATCATGACTGGTGCGAGTCCTTGAGTACATACCCTCGCACCTATGATCTTGTTCATGCAAGCTTTCTTTTCAAACATCTTGAGCAAAGATGTGAGATTGTAGATGTGGTTGTGGAGATAGATCGCATACTGAGACCAGATGGGTATGTACTGGTTCAGGACACTGTGGAAATGATGAACAAGCTTGGTCCGGTTCTGCATTCACTTCATTGGTCTGTAACATTGTATCAAAATCGGTTTCTTGTTGGTAAGAAGAGTTTCTGGCGTCCAAGACCTTAG 906 0.4205 MVTVTKAMCWSVVAKTLDSSGIGLVIYQKPTSSSCYQERKENTPPLSHVVQTETIEENVHEPTIASNAKHITVTVSLTSIPSDFVFMIRYAKLSGCLIPLPVDGEGNIQSWPMSWPQRLTGIPPSLSSESDVTEKFLNDTKHWSELVSDVYIDGLSINWSSVRNVMDMNAGYAGFAASLIDLPVWVMNVVPIDMPDTLTTIFDRGLIGLYHDWCESLSTYPRTYDLVHASFLFKHLEQRCEIVDVVVEIDRILRPDGYVLVQDTVEMMNKLGPVLHSLHWSVTLYQNRFLVGKKSFWRPRP 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01695 301 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 1 298 IPR004159 GO:0008168
Vimu6g01695 301 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 90 287 IPR004159 GO:0008168
Vimu6g01695 301 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 1 48 IPR004159 GO:0008168
Vimu6g01695 301 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 159 280 IPR029063 -
Vimu6g01695 301 Gene3D Vaccinia Virus protein VP39 163 299 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01695 Vimu-Chr6 15528256 15529618 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01695 - - gmx:100808221 450.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01695 6 15528256 15529618 Vimu6g01695 6 15528256 15529618 ECH
Vimu6g01695 6 15528256 15529618 Vimu1g00872 1 5950137 5953808 PCT