Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00872 ATGGCAATTTTAGCTGAAGACTTCTTCAAAGAGAGGAAATACCCTTTCATTTTCACTCTCTTAATCTTGCTCGTTTGTGTCGCGTTCTTCCTCTTCAGCTTCTCCAGCACCAGCTCAAACCCTGTTGCTTTCTATTCTGTTATCCAACACCAAGCACCTCCTCATCATGATTCAAAACCTAAAGAGCAAGAGCTTCCTCCAAAGGTGACCAATGTCACGGCTGAAGAAGACCAAGGTTTGCCCCCAGAGGAGGATGCCTTGACCATTGATTGGAAGCTGTGTAAGGACCCGCAGAATGTTGATTTTATACCATGTTTGGATAATTTTATGGCCATTAAGGCTCTTAAGTCGAGGAGGCACATGGAGCACAGGGAAAGACATTGCCCTGAGACTAGTCTTCACTGCTTGTTGCCTCTTCCAAAAGGGTATAAAGCCCCAGTTCCGTGGCCTAAGAGCAGGGATAAGGTTATTGAAGAAATTGTTGTACTCTTAGCTTTACTTATTTGGTATGATAACGTTCCTCATCCAAAGCTGGTGGAGTACAAGAAAGACCAGCACTGGGTAGTAAAGTCTGGAGAATATTTAGTTTTTCCTGGTGGTGGTACTCAATTCAAAGATGGAGTAGATCATTACATTGAGTTCATACAGAAGACATTACCAGCAATTAAATGGGGAAAGCATACCAGGGTTGTTCTAGATGTTGGCTGTGGTGTTGCTAGCTTTGGTGGCTATTTGGTGGACAAAAATGTTGTTACTATGTCATTTGCCCCAAAGGATGAACATGAAGCTCAGATACAGTTTGCCTTGGAACGAGGAATACCTGCAACTCTTTCTGTCATTGGAACACAGAAGTTGACTTTTCCTGATAATGGCTTTGATTTGATCCATTGTGCACGATGTAGGGTTCACTGGGATGCAGATGGTGGGAAGCCCTTATTTGAGCTCAATAGGATTCTTAGACCTGGTGGTTTCTTTGCATGGTCTGCAACACCAGTCTACCGAGATGATGAAAGAGATCAGAAAGTATGGAATGCCATGGTGGATATAACAAAAGCCATGTGCTGGAAGGTTGTGGCTAAGGCTCATGATTCATCTGGAATTGGACTTGTTATATACCAGAAGCCCACCTCATCTTCTTGCTATGAAAAACGTAAAGAGAACAATCCACCTTTATGTGAAAATGAAGATGGGAAGAACAGCTCATGGTATGCCAGGCTCAATAGTTGCCTGACTCCTCTTCCGGTTGATGATAAGGGTAACCTGCAGAGCTGGCCTAAGTCTTGGCCCCAGAGGCTTACCAGTAAGCCACCTAGCTTACCTACTGATTCAGTTTCCAAGGATAAGTTCTTCAAGGACAGCAAACGTTGGTCTGAATTAGTTTCAGATGTTTATGTGAATGGTCTCCCTATAAATTGGTCAAGTGTTCGAAATGTAATGGACATGAATGCTGGTTATGCAGGATTTGCTGCTGCTCTCGTTGATCTTCCAGTGTGGGTGATGAATGTAGTACCTATTGATGTGCCTGATACTCTTAGTATTATAATGGACAGAGGGTTTATAGGAATGTATCATGATTGGTGCGAGTCCTTTAGTACCTATCCTCGCACATACGATCTTCTTCACTCTAGCTTTCTGTTCAAATATCTTGAGCCAAGATGTGACATTTTAGATGTGGCTGTGGAGATTGATCGCATATTGAGACCAAATGGATATCTCGTGGTTCACGATTCTATGGAGATACTAAACAAGCTCACTCCAATTTTGCGCTCACTTCACTGGTCTGTCACGTTGCATCAGGATCAGTTTCTTGTAGCTAGGAAGGGTTTCTGGCGACCTACGAGCTCCTCAGACTGA 1854 0.4331 MAILAEDFFKERKYPFIFTLLILLVCVAFFLFSFSSTSSNPVAFYSVIQHQAPPHHDSKPKEQELPPKVTNVTAEEDQGLPPEEDALTIDWKLCKDPQNVDFIPCLDNFMAIKALKSRRHMEHRERHCPETSLHCLLPLPKGYKAPVPWPKSRDKVIEEIVVLLALLIWYDNVPHPKLVEYKKDQHWVVKSGEYLVFPGGGTQFKDGVDHYIEFIQKTLPAIKWGKHTRVVLDVGCGVASFGGYLVDKNVVTMSFAPKDEHEAQIQFALERGIPATLSVIGTQKLTFPDNGFDLIHCARCRVHWDADGGKPLFELNRILRPGGFFAWSATPVYRDDERDQKVWNAMVDITKAMCWKVVAKAHDSSGIGLVIYQKPTSSSCYEKRKENNPPLCENEDGKNSSWYARLNSCLTPLPVDDKGNLQSWPKSWPQRLTSKPPSLPTDSVSKDKFFKDSKRWSELVSDVYVNGLPINWSSVRNVMDMNAGYAGFAAALVDLPVWVMNVVPIDVPDTLSIIMDRGFIGMYHDWCESFSTYPRTYDLLHSSFLFKYLEPRCDILDVAVEIDRILRPNGYLVVHDSMEILNKLTPILRSLHWSVTLHQDQFLVARKGFWRPTSSSD 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00872 617 CDD AdoMet_MTases 231 325 - -
Vimu1g00872 617 Pfam Putative S-adenosyl-L-methionine-dependent methyltransferase 101 601 IPR004159 GO:0008168
Vimu1g00872 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 459 589 IPR029063 -
Vimu1g00872 617 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 345 IPR029063 -
Vimu1g00872 617 PANTHER SAM-DEPENDENT METHYLTRANSFERASE 21 611 IPR004159 GO:0008168
Vimu1g00872 617 Gene3D Vaccinia Virus protein VP39 210 361 IPR029063 -
Vimu1g00872 617 FunFam probable methyltransferase PMT23 203 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00872 Vimu-Chr1 5950137 5953808 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00872 - - gmx:100800390 1092.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g00872 1 5950137 5953808 Vimu1g00872 1 5950137 5953808 ECH
Vimu6g01695 6 15528256 15529618 Vimu1g00872 1 5950137 5953808 PCT