Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01692 ATGCTTCTCAGAACCGCTTCTTCTTTCTCTCTGCTCAACGCCAACGCCGACCCCGACCATATACTCCCTCTCATAAACCCTTCTTCTGCTATTCGCTGCTACTCTCATGCCAAAAGCTTCGTTCCCTGCGCCACCAAGGGCTCAAACAACCGTCCCTTAACCGGCGTCGTTTTTGAACCCTTTGAAGAGGTCAAGAAGGAGCTCGACCTTGTCCCCACACTTCCAGAAGCTTCCCTTGCTCGCCAGAAGTACACCAATGAGTCTGAAGCTGTTGTCAACGAACAGATCAATGTGGAGTACAATGTTTCGTATGTTTACCACGCGATGTTTGCTTACTTCGACAGGGACAATGTTGCGCTCAAGGGTCTTGCCAAATTTTTTAAGGAGTCAAGTGAGGAGGAAAGGGAGCATGCTGAGAAATTGATAGAATATCAGAATAAACGTGGTGGAAAAGTGAAGTTGCAATCTATTGTGATGCCTCTTTCTGAGTTTGACCATGATGAAAAGGGAGATGCCCTGTATGCAATGGAACTTGCTCTGTCTTTGGAGAAGCTGACAAATGAGAAACTTCTTAACTTGCACAGTGTTGCCTCGAAGAACAATGATGTGCAATTGACAGATTTTATCGAAAGCGAATTTTTAGGTGAACAGGTCGAAGCTATTAAAAAAATCTCTGAGTACGTTGCTCAGCTGAGAAGAGTTGGCAAAGGACATGGTGTGTGGCACTTTGATCAAATGCTGCTCCATGAGGAGGGAGTTAATGTTTGA 768 0.4531 MLLRTASSFSLLNANADPDHILPLINPSSAIRCYSHAKSFVPCATKGSNNRPLTGVVFEPFEEVKKELDLVPTLPEASLARQKYTNESEAVVNEQINVEYNVSYVYHAMFAYFDRDNVALKGLAKFFKESSEEEREHAEKLIEYQNKRGGKVKLQSIVMPLSEFDHDEKGDALYAMELALSLEKLTNEKLLNLHSVASKNNDVQLTDFIESEFLGEQVEAIKKISEYVAQLRRVGKGHGVWHFDQMLLHEEGVNV 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01692 255 ProSitePatterns Ferritin iron-binding regions signature 2. 202 222 IPR014034 -
Vimu6g01692 255 ProSiteProfiles Ferritin-like diiron domain profile. 82 235 IPR009040 -
Vimu6g01692 255 SUPERFAMILY Ferritin-like 76 249 IPR009078 -
Vimu6g01692 255 Pfam Ferritin-like domain 92 234 IPR008331 GO:0008199
Vimu6g01692 255 Coils Coil 128 148 - -
Vimu6g01692 255 CDD Euk_Ferritin 86 245 - -
Vimu6g01692 255 Gene3D - 51 252 IPR012347 -
Vimu6g01692 255 PANTHER FERRITIN 61 249 IPR001519 GO:0006826|GO:0006879|GO:0008199
Vimu6g01692 255 FunFam Ferritin 51 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01692 Vimu-Chr6 15517854 15519844 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01692 K00522 - gmx:547476 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01692 6 15517854 15519844 Vimu1g00868 1 5921406 5923928 ECH
Vimu6g01692 6 15517854 15519844 Vimu6g01692 6 15517854 15519844 ECH
Vimu6g01692 6 15517854 15519844 Vimu1g00868 1 5921406 5923928 PCT