Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01684 ATGCCTTCTTCCCTTCACTTCCAAAGGTTCAATCCTATAACCGACGCCGCCACCATCTCTTCCGCCGCAATCGCCAACGGCCTAAACTGCCCCAAACAGTCTCAAGCGCCGCCTCCCGCCGTTGCGCGTCGTCTCCTCCTCCCCTCTCTCCCCGACGCGGTGGCGCGGCACCACGCGCTCGTGGCGGGGCCCAACCAGTGCTGCTCCGTCGTGGTCCAACCTATCAGCGCCCCCGTCTCCGCCGTGTGGGCGGTGGTGCGGCGCTTCGACCATCCGCAGGGCTACAAGAACTTCGTGAAGAGCTGCCACGTCATCACCGGCGACGGCATTCGTGTGGGCGCCGTCCGCGAGGTGAGGGTGGTGTCGGGGCTCCCGGCGGAGTCGAGCACCGAGCGTCTGGAGATCCTGGACGACGAGCGCCACGTCATGAGCTTCAGCGTGGTCGGCGGCAACCACCGGCTGAGAAATTACAGGTCGGTGACGACGCTTCACGCTAGCGGGAACGGGACGCTTGTTATCGAGTCGTATGTGGTGGACGTACCGCAGGGTAACACTAAGGAGGAAACGTGCGTGTTCGTCGACACCATTGTACGTTGCAACTTGCAGTCGCTGGCTCAGATCGCTGAAAATAGGACCCCAATCTCTGAACAACGAAACTGTTGA 663 0.6229 MPSSLHFQRFNPITDAATISSAAIANGLNCPKQSQAPPPAVARRLLLPSLPDAVARHHALVAGPNQCCSVVVQPISAPVSAVWAVVRRFDHPQGYKNFVKSCHVITGDGIRVGAVREVRVVSGLPAESSTERLEILDDERHVMSFSVVGGNHRLRNYRSVTTLHASGNGTLVIESYVVDVPQGNTKEETCVFVDTIVRCNLQSLAQIAENRTPISEQRNC 220
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01684 220 SUPERFAMILY Bet v1-like 67 208 - -
Vimu6g01684 220 CDD PYR_PYL_RCAR_like 67 209 - -
Vimu6g01684 220 FunFam Abscisic acid receptor PYL4 29 220 - -
Vimu6g01684 220 PANTHER - 66 209 - -
Vimu6g01684 220 Pfam Polyketide cyclase / dehydrase and lipid transport 68 209 IPR019587 -
Vimu6g01684 220 Gene3D - 32 220 IPR023393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01684 Vimu-Chr6 15458192 15460108 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01684 K14496 - gmx:100808416 340.502
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01684 6 15458192 15460108 Vimu1g00863 1 5863214 5863849 ECH
Vimu6g01684 6 15458192 15460108 Vimu6g01684 6 15458192 15460108 ECH
Vimu6g01684 6 15458192 15460108 Vimu1g00863 1 5863214 5863849 PCT