Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu1g00863 ATGACTTGCCCTGTACAACTCCACCGATTCAGCCCTACAACCGATGCATCCACCGCCATAGCAAACGGCGTTAACTGTCCCAAGCCACCGCAGACGGTGCCGTCAACGCGACGTCTCTTGCCCAAGGGAAGCGTGCCGGAGGCGGCGGCGCGCCACCACACGCATGCGGTGGGGCCCGGCCAGTGCTGCTCCGTCGTCATTCAGGCGATCGAGGCGCCGGTCTCCGCCGTGTGGCCCGTGGTGCGACGCTTCGACAATCCGCAGAGGTACAAGCACTTCGTGAAGAGCTGCCACGTGGTCGCCGGCGACGGCATTCGCGTTGGCGCGCTCCGCGAGGTGCGCGTGGTCTCTGGCCTCCCGGCCGTTTCGAGCACCGAGCGACTCGAGATCCTTGACGACGAGCGGCACGTGATGAGCTTCAGCGTGATCGGCGGCGACCACCGCCTGAGGAACTATCGGTCTGTGACGACGCTGCACGGTGACGGTAACGGAGGCACGGTTGTGATCGAGTCCTACGTGGTTGACGTACCGCCAGGTAACACTAAGGAGGAGACTTGCGTCTTCGTGGACACAATCGTACGGTGCAATCTGCAGTCCCTCGCTCAGATCGCTGAAAACATGGCAAGTCAACACTGA 636 0.6289 MTCPVQLHRFSPTTDASTAIANGVNCPKPPQTVPSTRRLLPKGSVPEAAARHHTHAVGPGQCCSVVIQAIEAPVSAVWPVVRRFDNPQRYKHFVKSCHVVAGDGIRVGALREVRVVSGLPAVSSTERLEILDDERHVMSFSVIGGDHRLRNYRSVTTLHGDGNGGTVVIESYVVDVPPGNTKEETCVFVDTIVRCNLQSLAQIAENMASQH 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu1g00863 211 Gene3D - 33 211 IPR023393 -
Vimu1g00863 211 Pfam Polyketide cyclase / dehydrase and lipid transport 68 205 IPR019587 -
Vimu1g00863 211 CDD PYR_PYL_RCAR_like 62 205 - -
Vimu1g00863 211 FunFam Abscisic acid receptor PYL4 25 211 - -
Vimu1g00863 211 PANTHER - 61 205 - -
Vimu1g00863 211 SUPERFAMILY Bet v1-like 62 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu1g00863 Vimu-Chr1 5863214 5863849 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu1g00863 K14496 - gmx:100804400 366.311
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01684 6 15458192 15460108 Vimu1g00863 1 5863214 5863849 ECH
Vimu1g00863 1 5863214 5863849 Vimu1g00863 1 5863214 5863849 ECH
Vimu6g01684 6 15458192 15460108 Vimu1g00863 1 5863214 5863849 PCT