Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01673 ATGCGCATGCTCACCGGCGATTCCACCGCCGAAACCTTCCGATTCGTTCCGCAATCCATCGCCGCCTTCGGCTCCACTGTCCTCGTCGAGGGCTGCGACACCACCCGTAACATTGCCTGGGTTCACGCCTGGACTGTCGCGGATGGGATAATTACTCAGGTGAGAGAGTACTTTAACACTGCCCTCACCGTCACCCGCTTCGAAGCCTCCGGCGAGATTGTTCCCGCAAGCTCCGGCACCGGCCGCTTTCCTTGTGTGTGGGAGAGCAGCGTATCGGGTCGGGTCGGGAAATCCGTGCCCGGTTTGGTTCTGGCAATATAA 321 0.5981 MRMLTGDSTAETFRFVPQSIAAFGSTVLVEGCDTTRNIAWVHAWTVADGIITQVREYFNTALTVTRFEASGEIVPASSGTGRFPCVWESSVSGRVGKSVPGLVLAI 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01673 106 PIRSF Wun1 1 106 IPR016533 -
Vimu6g01673 106 PANTHER OS07G0691300 PROTEIN 1 106 IPR009798 -
Vimu6g01673 106 Pfam Wound-induced protein WI12 1 106 IPR009798 -
Vimu6g01673 106 Gene3D - 1 74 - -
Vimu6g01673 106 SUPERFAMILY NTF2-like 3 63 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01673 Vimu-Chr6 15365968 15368893 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01673 - - gmx:100778637 185.652
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu1g01342 1 10988681 10989058 Vimu6g01673 6 15365968 15368893 ECH
Vimu6g01673 6 15365968 15368893 Vimu6g01673 6 15365968 15368893 ECH