Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01672 ATGGCCCTTTTTGTGTGGATCACATGTGTTGCTATTTCGGGTGCAATTCTGTTCCTGGTCATGACAGGCATGTTGAATGGTGTGCTTCCGAAGAAGTCTCAGAGAAATGCATGGTTTGAAATAAATAACCAAATACTCAATGCATTGTTTACACTCATGTGCTTGTATCAACACCCTAAGAGGTTCTACCACCTTGTTCTTCTCATCAGATGGAAACCAAATGACATCTCTAGACTTAGAAATTTGTACTGCAAGAATGGTACTTACAAGCCCCATGAGTGGACACATATGCTGGTAGTGGTTATTCTCCTTCATGTTAACTGCTTCGCCCAATATGCACTTTGTGCTCTAAACTTGGGTTATAAAAGATCTGAGAGACCCGCCATTGGAGTCGGAATATGTATATCTTTTGCAATTGCTGCTCCTGCGGTTGCTGGTTTGTACACCATTCTCAGTCCACTTGGAAAGGACTATGACTGTGACACGGATGAAGAAGTACAGGTGCAAATTACTGGCTCTCAAAGGCAAGAGCAGCCGAGAGAGAAACCATGCGAGAACAAGTATTCATTTGCATCAAAAGATCAACAAAGATTTGTTGAAAATAGACCAAAGTGGAGTGGAGGAATACTTGAC 633 0.4202 MALFVWITCVAISGAILFLVMTGMLNGVLPKKSQRNAWFEINNQILNALFTLMCLYQHPKRFYHLVLLIRWKPNDISRLRNLYCKNGTYKPHEWTHMLVVVILLHVNCFAQYALCALNLGYKRSERPAIGVGICISFAIAAPAVAGLYTILSPLGKDYDCDTDEEVQVQITGSQRQEQPREKPCENKYSFASKDQQRFVENRPKWSGGILD 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01672 211 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 211 - -
Vimu6g01672 211 Pfam Protein of unknown function (DUF2985) 1 71 IPR021369 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01672 Vimu-Chr6 15359283 15359919 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01672 - - gmx:100811964 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01672 6 15359283 15359919 Vimu1g00848 1 5730786 5732468 ECH
Vimu6g01672 6 15359283 15359919 Vimu6g01672 6 15359283 15359919 ECH
Vimu6g01672 6 15359283 15359919 Vimu1g00848 1 5730786 5732468 PCT