Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01540 ATGAACCACTCTGAGGAAAACAATGATGTTGATGTTGCTGCTGCTGCAGCTGCTAGACAGAAGAAAATCGACGATTTGGCTTCCAGTGACTGCTTCACGAAATGCAAAATGGTGGTATTCAACTTTCCACAATCTCACAGCCATGGTTGGTGCAGGTGTTCTCACCCTTCCCTTTGCCATGTCAAATATGGGCTGGGGTCCTGGAGCTACCGTGCTTTTGTTGTCATGGATTATCACCCTTTATACGCTGTGGCAAATGGTGGAGATGCACGAAATGCCAAGGGTGTTGAACCAGATGCGAATTATGGTATCCGAGCCACCAATTCCACTGATGCAGTGTTCAACTTTCTTTCTGCATTGGGCGATGTAGCATTTGCCTACGCAGGCCACAACGTGGTGTTTGCCATGCCAGTGTTTGATATGATCGAAACCTACATGGTTACGAAGTTGAATTTTCCACCTTCTGCTGTTCTACGAGTAACAACTCGAACTGTATATGTTGCATTGACTACGGTGGTTGCCATATGTATCCCTTTCTTTGGATCTCTACTTGGATTTCTTGGAGGCTTTGCCTCTGCTCCAACTTCGTTTTTTTTGCCCTGTGTCATATGGCTCAAGCTCATTAAACCGAAGAGATATGGCTTGTCTTGGACAATCAACTGGATATGCATTGTTCTTGGGGTATTGTTGATGATACTGTCTCCTATTGCTGCTATGAGAAATATTGTTATGTCAGCCAAAGACTACAAGTTCTTCTCATAA 762 0.4436 MNHSEENNDVDVAAAAAARQKKIDDLASSDCFTKCKMVVFNFPQSHSHGWCRCSHPSLCHVKYGLGSWSYRAFVVMDYHPLYAVANGGDARNAKGVEPDANYGIRATNSTDAVFNFLSALGDVAFAYAGHNVVFAMPVFDMIETYMVTKLNFPPSAVLRVTTRTVYVALTTVVAICIPFFGSLLGFLGGFASAPTSFFLPCVIWLKLIKPKRYGLSWTINWICIVLGVLLMILSPIAAMRNIVMSAKDYKFFS 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01540 253 Pfam Transmembrane amino acid transporter protein 132 238 IPR013057 -
Vimu6g01540 253 PANTHER OS05G0424000 PROTEIN-RELATED 134 238 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01540 Vimu-Chr6 14435430 14437770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g01540 129 253 Organic Solute Cotransporters AT1G48640 64.000 9.90e-53 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01540 K26385 - gmx:100786115 206.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01540 6 14435430 14437770 Vimu6g01540 6 14435430 14437770 ECH
Vimu6g01540 6 14435430 14437770 Vimu11g01820 11 25245841 25247922 PCT