Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01521 ATGAATGTGGCTCGTTATGACTTTGCTTGTGCTGAAGTGAATGGCCTGGTTTATGCTGTTGGGGGCTATGGTGAGAATGGAGACAGTTTGTCCACTGCTGAGGTGTATGACCCAGATACCGACGAATGGACACTGATAGAGAGCCTTCGCCGTCCGAGATGGGGTTGTTTTGCTTGTGGATTTGAGGGTAAGCTCTATGTCATGGGTGGAAGGTCAAGCTTCACCATTGGAAACTCCAAGTTTGTTGATATATACAACCCTGAGAGACACACCTGGTGTGAGATTAAGAATGGCTGTGTTATGGTCACAGCTCACGCAGTAGTAGGAAAAAAGTTATTCTGCATAGAATGGAAGAACCAGCGGAAGCTGGCTATATTCAGTCCAGAGGACAATTCATGGGAAATGGTTCCAGTTCCATTGACAGGGAGCACCAGTGTTGGTTTTCGGTTCGGGATGCTGGATGGCAAGTTGCTGCTCTTCCCTCTGCTGGCAGAACATGCTCATCAAACATTATCGTATGATCCAAATGCAGCTCTGGGGTCAGAGTGGCGGACTTGTGACATAAGGCCATCTGGTTTGTGCTTATATTGTGTAACAATCAAGGCATGA 609 0.4713 MNVARYDFACAEVNGLVYAVGGYGENGDSLSTAEVYDPDTDEWTLIESLRRPRWGCFACGFEGKLYVMGGRSSFTIGNSKFVDIYNPERHTWCEIKNGCVMVTAHAVVGKKLFCIEWKNQRKLAIFSPEDNSWEMVPVPLTGSTSVGFRFGMLDGKLLLFPLLAEHAHQTLSYDPNAALGSEWRTCDIRPSGLCLYCVTIKA 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01521 202 SMART kelc_smart 64 111 IPR006652 GO:0005515
Vimu6g01521 202 SMART kelc_smart 16 63 IPR006652 GO:0005515
Vimu6g01521 202 PANTHER OS02G0202900 PROTEIN 1 195 IPR045887 -
Vimu6g01521 202 Pfam Kelch motif 56 96 IPR006652 GO:0005515
Vimu6g01521 202 Pfam Kelch motif 4 49 IPR006652 GO:0005515
Vimu6g01521 202 SUPERFAMILY Kelch motif 1 160 IPR015915 GO:0005515
Vimu6g01521 202 Gene3D - 1 194 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01521 Vimu-Chr6 14337748 14338356 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01521 - - vum:124841082 428.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01521 6 14337748 14338356 Vimu11g01854 11 26046989 26047546 PCT