Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01504 ATGAAGAGCCGTTATCCGTTACAGGAGAAACGGTGGTTGCTGGGCCTGCCCGTGGTGGGCCTGATTGTCCTTGGGTTTTTCCTCTCAACCGCTGGCCGATCTTCGGGAACAGCCTACCTGTGTCCGAGCACGCTGGGGATTCGAACCCGAAAAGAATTCAATTACGACCCGGCACCGATCCAGACGCGCGCCATTCTCCACTATGCCACCTCGCGCGTGGTGCCGCAGCAATCGGTGGCAGAGATCAAGATCAGTCTGGACGTGATAAAGTCACTGGGCCGGCCATGCAACTTCCTTATCTTCGGGTTGGGCCACGATTCCCTCATGTGGGCCTCGTTCAACCCGGGTGGCACCACGGTGTTCCTCGAGGAGGATCCTAAGTGGGTCCATTCGATCTTGAAAGACGCGCCGGGCCTGCGGGCTCATACGGTCCGTTACCGTACGCAGCTTCGCGACGCCGATACGCTGCTCACCTCGTACCGCTCCGAAGCCACGTGTTCTCCTGCGACGGCGTACCTTCGTGGCAACCAAGCGTGCAAGCTGGCGCTGGAGAATCTCCCCAACGAGGTTTACGAGACGGAGTGGGACATGATCATGGTCGACGCGCCGAAGGGGTACTTCGCGGAGGCGCCGGGGCGGATGTCGGCGGTGTTCTCCGCCGCTGTGATGGCGCGCAACCGGAAGGAAGCCGGTGTGACGCACGTGTTCTTGCATGACGTGGATCGCAAGGTGGAGAAGGTTTACGCGGAAGAGTTTCTGTGTATGAAGAACTTGGTGAATGGTGCTGGAAGGCTTTGGCACTTTCAGATTCCTCCTTCTAACGACACCCTTTCTTCTAGTTTCTGCTAG 849 0.5866 MKSRYPLQEKRWLLGLPVVGLIVLGFFLSTAGRSSGTAYLCPSTLGIRTRKEFNYDPAPIQTRAILHYATSRVVPQQSVAEIKISLDVIKSLGRPCNFLIFGLGHDSLMWASFNPGGTTVFLEEDPKWVHSILKDAPGLRAHTVRYRTQLRDADTLLTSYRSEATCSPATAYLRGNQACKLALENLPNEVYETEWDMIMVDAPKGYFAEAPGRMSAVFSAAVMARNRKEAGVTHVFLHDVDRKVEKVYAEEFLCMKNLVNGAGRLWHFQIPPSNDTLSSSFC 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01504 282 PANTHER OS11G0490100 PROTEIN 21 282 IPR006514 GO:0045492
Vimu6g01504 282 NCBIfam TIGR01627 domain 63 282 IPR006514 GO:0045492
Vimu6g01504 282 Pfam Polysaccharide biosynthesis 80 268 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01504 Vimu-Chr6 14220206 14221781 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01504 - - gmx:100791951 480.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01504 6 14220206 14221781 Vimu11g01880 11 27175669 27178224 PCT