Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01491 ATGGATCCAGACGCAGTAGCAAAGGCATTCGTGGAACATTACTATTCAACCTTCGATACCAATCGCAACAATCTCGGCAATCTCTATCAGGAGGCTTCTATGCTTTCCTTCGAAGGTCAGAAGATCCAGGGCGCCCACAACATCGTCGCCAAGCTCACTTCCCTTCCCTTCCACCAGTGTCAACACTCCATCACCACCGTCGATTGCCAGCCCTCCGGCGTCGGCGCCGGCATGCTCGTCTTCGTCAGCGGCAACCTCCAGCTTGCCGGCGAACAACATGCCCTAAAATTCAGCCAGATGTTCCATTTGATGCCATCGCCGCAGGGAAGCTATTATGTGTTGAATGACATATTCCGGTTGAACTATGCATGA 372 0.5242 MDPDAVAKAFVEHYYSTFDTNRNNLGNLYQEASMLSFEGQKIQGAHNIVAKLTSLPFHQCQHSITTVDCQPSGVGAGMLVFVSGNLQLAGEQHALKFSQMFHLMPSPQGSYYVLNDIFRLNYA 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01491 123 PANTHER NUCLEAR TRANSPORT FACTOR 2 2 122 IPR045875 GO:0006913
Vimu6g01491 123 Pfam Nuclear transport factor 2 (NTF2) domain 6 120 IPR002075 -
Vimu6g01491 123 Gene3D - 1 123 - -
Vimu6g01491 123 ProSiteProfiles Nuclear transport factor 2 domain profile. 6 120 IPR018222 -
Vimu6g01491 123 FunFam Nuclear transport factor 2 1 123 - -
Vimu6g01491 123 CDD NTF2 2 122 IPR018222 -
Vimu6g01491 123 SUPERFAMILY NTF2-like 3 121 IPR032710 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01491 Vimu-Chr6 14185637 14186641 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01491 - - gmx:100500395 234.187
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01491 6 14185637 14186641 Vimu11g01886 11 27410433 27410801 PCT