Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g01482 ATGTCTGCTGCTGTGTCTTCCACAACTTCTCGTTTTGTGGAAGAGCTCAAAAACAAACTAACCGACAACGACAACAGCAACAACGTTGTTGTTGGCGAACCAGAGCAGCCCCCGTACAGTGATAGTGCCAACTCTGATGTTGCAGAAGAAACTGAGCCAGAGGAAGATGATGATGATTCCAAGTTGGAATCTGACAGAGAACTGGATATTGGTCCCCAAATCACCCTCAAGGAACAGCTTGAGAAAGATAAAGATGACGAGAGTTTGAGAAAATGGAAGGAGCAACTTCTGGGCAGTGTTGATATGTCTTTCGTTGGAGCAACTAAAGACCCTGATGTGAAGATTTTGAGCCTCACTATTACAAGCCCAGACAGGCCTGATCTAGTCCTGCCAATTCCATTTACAAATGATCCTAAGAAAAGCCTCTTCATCCTTAAGGAAGGAAGCAAGTGCGCCATGAAATTCACCTTCTCTGTCTCCAACAACATCGTTTCTGGTCTCAAATACACGAATGTTATTTGGAAAACTGGCGTTAGAGTGGCCAGCAGAAAAAAGATGTTGGGAACTTTTAGTCCCCAGAAGGAACCATATACGTATTCATTGGAAGAAGAAAGCACCCCTTGTGGCATGTTCGTCAGGGGAACCTATGCAGCAAGAACCAAGTTTGTAGATGACGATCAAAAATGCTACTTGGACGTCAATTACTACTTCGAAATTCAGAAGAATTGGGCAAAACCTGAATGA 744 0.4368 MSAAVSSTTSRFVEELKNKLTDNDNSNNVVVGEPEQPPYSDSANSDVAEETEPEEDDDDSKLESDRELDIGPQITLKEQLEKDKDDESLRKWKEQLLGSVDMSFVGATKDPDVKILSLTITSPDRPDLVLPIPFTNDPKKSLFILKEGSKCAMKFTFSVSNNIVSGLKYTNVIWKTGVRVASRKKMLGTFSPQKEPYTYSLEEESTPCGMFVRGTYAARTKFVDDDQKCYLDVNYYFEIQKNWAKPE 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g01482 247 SUPERFAMILY E set domains 50 243 IPR014756 -
Vimu6g01482 247 MobiDBLite consensus disorder prediction 47 63 - -
Vimu6g01482 247 MobiDBLite consensus disorder prediction 22 46 - -
Vimu6g01482 247 PANTHER RHO GDP-DISSOCIATION INHIBITOR 50 244 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vimu6g01482 247 Pfam RHO protein GDP dissociation inhibitor 55 242 IPR000406 GO:0005094|GO:0005515|GO:0005737|GO:0007266
Vimu6g01482 247 FunFam Rho GDP-dissociation inhibitor 1 66 245 - -
Vimu6g01482 247 Gene3D Coagulation Factor XIII, subunit A, domain 1 66 245 IPR024792 -
Vimu6g01482 247 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g01482 Vimu-Chr6 14105917 14107698 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g01482 K12462 - gmx:100797593 380.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g01482 6 14105917 14107698 Vimu11g01906 11 28561284 28562617 PCT