Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00570 ATGTCCACCATGAAAAGAAACCTCAAGGATCAAGAACACTACTTCCACTCTTCATGGACCATAGCAAAACTAATCACCTCCTTCTTCCTCTTGGTTTCCATCTCCTACCTCTTCTACTCCCTTGGATTCATCACTCATTCACACGATTGTCCTAAAAAAAAGCCTTACCCTCTATCCACAACCACATACGTTTCCAACACCACCACCACCACTCCTCCAGCACCTCAGCACACAGCAAAACCCTCTGAGAAAACCAACATTTCACACATAGTGTTTGGCATAGCAGCCTCTTCCAGGCTCTGGAGGCAAAGAAAAGAGTACATGAAGCTATGGTGGAGGCCAAACGAAACAAGGGGAATAGTGTGGCTAGACCAAGCAGTGAAAAGTGAAGCAGGTGATGAGACCCTCTTGCCAACATTGAGAATATCGAGTGATGTCTCAAAGTTCAAGGTGAAGAATCGAGGTGAAGAGTTGGGGGTTCGTATATCTCGAATTGTGTCGGAGACAGTGAGGCTTGGGATGGAGAATGTGAGGTGGTTTGTGATGGGAGATGATGACACTTTCTTTGTGACTGAGAATTTGGTGAAGGTGTTGCAGAAGTATGATCACAACCAGTTCTATTACATAGGGGCCAATTCAGAGAGTCACTTGATGAACATTCACTTTTCCTATAACATGGCTTTTGGGGGTGGAGGTTTTGCCATAAGTTACCCTTTGGCTGTGGCATTGGAGAGAATGCAGGACCAGTGCCTCCAGAGATACCCTGCATTGTTGACCTCAGATGATAGGATCCAGGCTTGTATGGCAGAGCTTGGTGTCCCTCTCACCAAGGAAATTGGCTTTCACCAGTTTGATGTATATGGCAGCGTTTTTGGGCTCTTAGCAGCACATCCCGTTACACCTTTAGTTTCGATGCATCACTTGGACGTGATTGAGCCCATATTCCCGAACGTGAACCGTGTGGAGGCCCTACAGAAGCTTGTTGGGCCCATGAGACTGGACCCGTATGGGCTCATGCAGCAATCCATATGCTACGACAGAGCCCGGCACTGGACCGTTTCCGTTTCATGGGGTTATGCGGTTCAAATATTCCGGGGCATTTTCTTGGCCCGGGACATGGAGGTGCCGGGCAGAACCTTTCTGAATTGGATCCGGCGGGCGGATTATACCGGATTTCCATTCAACACGCGCCCTTTCAGCCGGAATGCTTGCCTGAAACCTTTTGTTTTCTACTTGGACAATGTCATCTACGATGGGGTTGCTGATGAGACTGTCAGTGACTATGTTCAGGTCCAGCCCAACCCGGATTGCAGGTGGAAAATGGCAGATCCGACCCAAATCTCAATGATTAGGGTTTATAAGAAAGTGGATTCGCATTTGTGGGACAAGGTAGGTTCTTTCTTTTCTCAAGTTTCACCTTATATTGATGTGTGGAATGGAGAATTTGGTTATTTAAAAGGGTTTTGGTTTGTGTTATTGTTTGAGCAGTCTCCGAGGAGAAATTGTTGCAGGTTTCGACCAACAAAGGAGGAAGGAAGTATGGTGATTGAAGTGGGAGAATGCAGAAAAGATGAATTTGCTAATTAA 1587 0.4657 MSTMKRNLKDQEHYFHSSWTIAKLITSFFLLVSISYLFYSLGFITHSHDCPKKKPYPLSTTTYVSNTTTTTPPAPQHTAKPSEKTNISHIVFGIAASSRLWRQRKEYMKLWWRPNETRGIVWLDQAVKSEAGDETLLPTLRISSDVSKFKVKNRGEELGVRISRIVSETVRLGMENVRWFVMGDDDTFFVTENLVKVLQKYDHNQFYYIGANSESHLMNIHFSYNMAFGGGGFAISYPLAVALERMQDQCLQRYPALLTSDDRIQACMAELGVPLTKEIGFHQFDVYGSVFGLLAAHPVTPLVSMHHLDVIEPIFPNVNRVEALQKLVGPMRLDPYGLMQQSICYDRARHWTVSVSWGYAVQIFRGIFLARDMEVPGRTFLNWIRRADYTGFPFNTRPFSRNACLKPFVFYLDNVIYDGVADETVSDYVQVQPNPDCRWKMADPTQISMIRVYKKVDSHLWDKVGSFFSQVSPYIDVWNGEFGYLKGFWFVLLFEQSPRRNCCRFRPTKEEGSMVIEVGECRKDEFAN 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00570 528 FunFam Fringe-related protein-like 77 332 - -
Vimu6g00570 528 Gene3D - 77 322 - -
Vimu6g00570 528 PANTHER FRINGE-RELATED 19 525 - -
Vimu6g00570 528 Pfam Protein of unknown function, DUF604 219 463 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00570 Vimu-Chr6 6903043 6905409 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu6g00570 21 523 Glycosyltransferase AT5G41460 53.435 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00570 - - gmx:100777888 813.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00570 6 6903043 6905409 Vimu9g00260 9 3130259 3135514 PCT