Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g00492 ATGGATAGAATGAAGAGGTTTTGCTCAAACGCATCCTTCATTTTATTAGCCACTCTCATCTTAACAAGTTGTATTGAGTCAGAGGCTCAAAAGTGTCGGCCAAGTGGGAGAATCAGAGGAAAGAAAGCACCTCCAGGACAATGCAACCAAGAGAATGATTCAGACTGCTGCATAGAAGGCAAACTTTACACAACATATGAATGTTCACCACCTATGTCCAGCAACACCAAGGCCTACCTCACTCTCAACAGTTTTCAGAAGGGTGGAGATGGTGGTGGCCCTTCAGAATGTGACAACCAATACCATTCTGATGACACACCTGTGGTCGCACTGTCTACAGGCTGGTTCAACCACAGAAGCAGGTGCCTCCACAACATCACCATCAGTGCTAATGGAAGAAGTGTTGTGGCCATGGTGGTTGATGAGTGTGACTCGACTGAGGGATGTGATGCAGACCATGACTATCAACCTCCATGTCCCAACAACATTGTTGATGCTTCTAGGGCTGTCTGGAAAGCATTGGGAGTACCCCCAAATGAATGGGGTGGCCTTGACATTACATGGTCTGATGCTTGA 576 0.4688 MDRMKRFCSNASFILLATLILTSCIESEAQKCRPSGRIRGKKAPPGQCNQENDSDCCIEGKLYTTYECSPPMSSNTKAYLTLNSFQKGGDGGGPSECDNQYHSDDTPVVALSTGWFNHRSRCLHNITISANGRSVVAMVVDECDSTEGCDADHDYQPPCPNNIVDASRAVWKALGVPPNEWGGLDITWSDA 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g00492 191 CDD DPBB_kiwellin-like 63 190 - -
Vimu6g00492 191 Gene3D - 76 190 IPR036908 -
Vimu6g00492 191 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 24 - -
Vimu6g00492 191 SUPERFAMILY Barwin-like endoglucanases 69 189 IPR036908 -
Vimu6g00492 191 PANTHER RIPENING-RELATED PROTEIN 2-RELATED 13 190 IPR039271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g00492 Vimu-Chr6 5669264 5669839 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g00492 - - vra:106758388 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g00492 6 5669264 5669839 Vimu6g00492 6 5669264 5669839 ECH
Vimu6g00492 6 5669264 5669839 Vimu9g00333 9 3959440 3964645 PCT